Id Trinity | TRINITY_DN51212_c1_g1_i13 |
---|---|
Name Transcript | Ll_transcript_519563 |
Sequence | CACTGTCACATCACACTAAAATACACTAAATTCACATCCCCTTTTTTCTTTGTATTTTTTTGTCATTCTATTCATCTTTTCACTTCTGCTATGGACCATG GTGGTACCATAATTTTTCACCCATAGAAAACTCTCATATTCCAAAATAGCCCACACAACATATTTCAAAAAAAACTACATGCCCACGCAGAAAAAAGCAA TCTTTTTTACTTCATCTATTATGCACTCAAGCTTCTTTCCTTCCCCAAATAGATTCTTCCCTCCTCAGCTTTTGATTCTCCACCAAACACCAAAACCCTA GTTTTTTTTACAATTCAATTATTCATTGTCTGAGTTCTGCACCCAAAACAGAACATACTCAAAGCTCTCCCTTTCTTTTGTTTCTATCGCATCCCTACCT CAATTCTCCGACCCTTTGATTTCTTCAATACTTTCCCCTGTTAAATTTCCATTTTCTTCAAGTGGGTTTTCGAGAAATTGACAACCTTTGCTTTCTGTTC ATGAATGGTTCTGAAGTTGCAGCAGCAATGTCGGATGACATGCTGATGCAATTCTCTTCAAACTCTTCCAACCAATCAGATCAGTCTCTGCCTACAAAGA TTGCAAAGCTGGAAGCTCGAATGGTGGGCCGAGGTTCCTCCAATGCTTCTCAGCAGTCAACTCGGTCCCCTGCTCCTTCTCCGGCTTCGAAATTTGCAGG AGTTGCTGAGAATATGGTTGAACCATCCACTTCAAGTGATTCTGATGACGATAATGGCGGGGAGTTCTTAATACAAGCCAACACACAGAAGCGTCAAAAA CATGAAGGACATGCCAGCTCCAGTGTGTTTGAGCGTGCTGAGGTTGTTACTGATGGAAGACAAACTAGTTTGGAGGCTACGGAGACAAAAACTAATGTTG ATGTGAATAGAAAGAAACCTGGCCGTGGAAGAGGCGGTTCTGGTTCAAGTAGAGGCCGTGGTTCCAGAGTTAATGATCAGACCAGAACACCGATTTCTCA TTCAGCTGTTTTGGCTTTAAATGGTCAGATTGATAATGATGGAAGACCCAAAGATCAGTTTCTTAATGATAACTACGCTTCATTAGAGGAAGTGGTTGCG TCTTTACGTGCAAAAGTTGTTGCATTGGAGGAGGACTTGCATAAATCAAAACAAGATACCTCTGACTATCAGAATCTTTGTCGGAAGTTAGAAAAGGAAC TGAAAGACCTAACAGATCATGAACAACAAATGAAGCCTAAGAGGACAAAGATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAAGC AAGGCTGAAAGTACGACAAGATTCATTGAGGCTTGGAAATATTGGTGTAATCAGAGCTGGAACAGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTG AAGGATCTGAATGCCCAGCTTAGACAACTAATAGAAACAAAAGAAGCAATTGAACGGCAGCGCAAGTTATTTAAGAAAAAACAACCTGATAAGGGAGATG GTACAGATGCAGAGGCTGGATTACCGGAAGATGTTCTCATTCACGATGAAATCTACAAGTCTCGACTAGCTAGTATTAAACGAGAAAAAAGCAGGAAGAA GAAATTATTCTGCGAGAGAGGGATCGTTACGAAATAGAGAAGGGGAAATTGATAAGGGAAATGAAACGCATACGGGATGAAGATGGTTCACGGTTTAACA ACTTTCAGATTCTTAATCATCGTTATGCCCTTCTAAATCTTCTTGGAAAGGGAGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATA TGTTGCTTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGACATGCAATTCGGGAATACAATATTCACAAGACC CTTGTGCATCATCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCACAATACATTCTGCACTGTTTTAGAGTACTGCAGTGGGAAGGATCTTGATG GTGTCCTTAAAGCAACACCTATATTACCCGAGAGGGAGGCTAGGGTGATTCTAGTTCAGGTTTTTCAAGGTCTTCTTTACATGAATAAAAGGACACAGAA GATTATCCATTATGATTTAAAGCCTGGAAACGTTCTGTTTGATGAGTTTGGCATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATAGTGGAGGATGAC GTCGGATCCCAGGGTATGGAACTTACATCTCAGGGTGCTGGAACATATTGGTAAGTGGTGAAGATCATTGTTTTTTAATGATGGTGAAGAGCATTGTCAA TGATATTCACAAAATTAGTGGTCCAAATTTGTAGATTTCCAGCTGCATTAAAATAGTAATTTAGTTATTGTTTGGAGCTATGCATATGGTAAGAGTTCCA TAGAGTCCAGCTTTTGGGAAAGGGGAAATGGCTTACCTTTATATTTTTAATATACTAGTTATACTTGATTCGGAGCAAAGTTGTTGATCCCATTGCTGCT GAACGAGTTTTGGTTTTTTGCCTGGTATGACATGGTAAAACAATGCACTAATCCCCTTGTTAATATCTGATAGTTAACTCCATTTGATTATACTAGAGGA GCACATGTGGACATGCTTAGATGGTATTTAAGTTCTGTATGACACAAAGTGTTAGTGTTATGTGTACCACTTGGTTAGCTGGTTCTCCTTGATGATTCTG CTCATGCATGAATCATATGATTTTTTATCTAGAAAAAAAGGCGGCACATGGCAAGAGACTCCCACTTAATGGAGTTTGGAGAGGGTAGATGTACACTAGG ACAATAATCTACTCCAGGTTTATGAAGCCAAAGAACAGTCATGGGTTACAGATGTATTGGTGGACTACTAGTAGTGTGGCTGTTATAATTTTTTTAACAT TCTATATCTCATATTTTCATGTGCAATATTGTGATTGTTAGTGTTTGAGACACTCATGCTAATCTAGCATCTTTTTCTTCCAATCAATATGACTTTGTCG CTCCTTTTAATGTTACCATGAGAGCTTTGTAAAAACCTTATGATGCCTTCTTGTTTTCTTTTTGAATTTTCAGGTATTTGCCCCCAGAATGCTTTGAGCT CAACAAGACTCCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTCGGAAGACGTCCCTTTGGGCATGACCAA ACACAAGAGAGAATACTTCGCGAAGACACAATCATTAAAGCACGCCGAGTTGAATTCCCTTCTAGGCCTACTGTTTCTAATGAGGCAAAGGATTTGATTA GACGGTGCCTAACATATAATCAGGCTGAGAGACCAGATGTGTTAACCATTGCTCAAGATCCATATCTCACTTACTCAAAGAAGTAATGGTTTCATTGATA TGGCTTTTGTTATCAAGCATCCATGGACCAAGAATGAATAATATCATATTCTAAGTTCTAACTGAAGTCAACATTGATGTATTCTCAGATTTTGTATAGG TTGTAAACATTTTTTTGATCTTTTCAGAGAGGTTGTTTCTCTACTCTGAAAGGAATTCCATTGTCTAAACTCTACATACATTTATCTTTTTGGTTCAATG TTTTGTGACTAAACATTTTCATTCATATAGTCGACTTCATATAGTAAGATTAAGACTTGATTGTTATGGTTCAATATGGTTCACAATTCACTCATGCATT CATGCATTTATCTTTAGTTCAAAGCATATAGTGCCATATAAACAATGAACAC BLAST |
Tissue | pods |
Gene name | LI_gene_183225; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519563
Blastp | Serine/threonine-protein kinase TOUSLED from Arabidopsis with 52.42% of identity |
---|---|
Blastx | Serine/threonine-protein kinase TOUSLED from Arabidopsis with 83.04% of identity |
Eggnog | Tousled-like kinase(ENOG410Y3FX) |
Kegg | Link to kegg annotations (AT5G20930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461830.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |