| Id Trinity | TRINITY_DN51214_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_517768 |
| Sequence | CACAAAAATTGCACTAGTGTAGTGATACCACTTTTGATATTGATTCATACTGAGTCATTGACAATCTGCATGGCTGTCATGGCATTCCTACTCCTAGGGA CATATCAAATTTATATTTATTTATTGCTCAGGTTCATGTTTATTTCTTATTAATCTTAAATCTTATCACTCATCAGTCAACATTACCTCATTAATCAAAT CTCGGCAATTTCAATAGCACTTTTCATTAGCTTTTCTCACAGATTCAAGCTTCGATTGCAAAAGTAGTTCAACGACAATCTGAGGCAATGGGAAAGAGAC GTAAAGATACACCAGGTACATCTGTGACAAGATCACAGCGCAATCAGCGAAATATTCATTCTAGGAGACAGAATCAAGTGAATGATACTCAAGGTTCTGA AGATAATGACGAGGACAATGACAATAATGAAAAGGACTCATCTTCTGCCGATGAGCGTTGTACAGAATCTAGGCAGAGTAAGCGAAAGAGATGGACCAGA GTTCGCCCTTCTCAACCCTCATCATCGAGGGCAAGCCCTGATGGTGGATGCATAGAAAGTGATATGGACATAAGTAGAGAAAATCAAGGAACTTCAAGGC AGATGACACGACCTCGAAAGCTTACGTGGGGAAGGGGTGGTTTTAGAAGTCACACACGGTATGGCAGTGGTGGTGGTAGCAATAGCAAAAGTTCCCGCAG CGGTCGAGTGTCTAAGTTGGTAGATCATCTCCGAAACTTGGATGAGAACACTGACGAGTTTGAAATCCATCTAATGCTTATTTCTCTGGACAAACAAAGT ACACCAATTTTGCAGCAGCCACACCTTTGCTGTCAACCAACTTTGTCTATCAAGCACCTTTGTGAATATGTTGCTTGTCAAACACCTTTGGCAGTTGAGG AAGTTGAGATATTGGCAGTTAAAGGATGCAGCAGTGCAAAGTCTGACAAGTCAGTTGATGACACTTCAGCCTTGATATGTGATAAACTAACGACAATGGT TATTGATCCATGCAAAGATGAACTGGAAATTCTGAAAGAACATGAATCCTTGGCTGGGATTACATCCAAATGCATATCTAAGATGGAGCATTTGATTCTT GCATACAGGCGTAAGGAGGCGCTATAATCATGTTGGATGCTCATACTTCTTTATGTACATAAAAGGAACCGTTGCGTGGAGTGGTCACTTCTCTAGTTGC ATCCTCAAGACCATAAAATATATCTACAAAATACTAAATTATGTGAACCTCTCTAAAGGTTATGCAAGCTTAGTGGTAAGCTTTAGATTCAATTTATATT ATACTAGTTGCAGTTTCAGCTTTATTTGATTTTCAGTGTTGCTCAATTACCAAAGGATATTTTTTAGCATAGTTTCAAATCTATCATCGAGATTGCAGTA ATTGTAGTAAACAGAGTGCTCTGCATATATAGCAGATTTCATAATATTCATTGTTGTAAATGAATGTTTTAATGTAAAAGGGTATGCTTTTTTAAATAGA CATTAATGAAGATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183239; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517768
| Blastp | Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 42.37% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase RING1a from Arabidopsis with 39.22% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT5G44280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432179.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |