Ll_transcript_519491

• Id Trinity: TRINITY_DN51215_c0_g1_i15
• Name Transcript: Ll_transcript_519491
• Sequence: ATCGGTATTTCACCTTTTCTTTCTCCCCAATCTAATATTTTGTTATTTACGGAAATAATATTTTTTATTTTTATAAAAAAAAATGATTTTTTTTCCTGGT TAGGTTTACAAACATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCCTCACAAATTGGACTTCAAAACGACATCGTTGGAAAAATTTCGGATGCAACA TCATTCGATCTTCCCAATTCAAGCGATTTTGATGGGTTTGTGAAAGAAGCTATTCAAATGGTGAAGCCTGCAAAGGGTACTACAACTCTGGCTTTTATAT TTAAGGATGGTGTTATGGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGATATATATCATCTCAGTCCGTGAAGAAAATTATTGAAATCAATCCATATAT GCTTGGGACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCATAGGAATCTTGGGATTAAGGTGATGCATGTTATTTTTCGAAATTGAATAATATCA CTTTTTTGTCTGTATTATTATTCTCTTTTGCTTGGTGTATTTTACTCTTATATTATTGTATGCACATTAGTGTGGATGCTTTTCGTGAGAAAACATATAG ACTAGTAAATACTCTAATGCTGAGAATGTTACTGTATAACCATAATGGTTTTGAAGGATGCTTTTTCAAATTTGTCAGGTTTCCTGTAGACATCAAACTA CTTATAATAACTCAATTCAGATTAACCATCTTATTGATTTTGTTCCGTCAAATTTGATGGGTTTATCTTCTAGATAAAATCTACGTCACTTCAAATTCTA GAAGCTTTACAGAATGATCTTTATAGTGTGAAAGAAACATTTTAACTCACCCAAAATGGCTATGTTTGCATTGGGGAATCGGTGCATTTATGATATCCAT GTGCATCAATAAATGTGTGTTCACCGATTCGTAACATAAACTTGTCCATTTTGGCTGTTAAAATGTGCCCTTGGACACACATCAGAAAAATCCTTAAATT ATTATTGTCTGCGGTTGTGGGCCTAATGGGGACATGCTAATGGCCTTGGATGCCTATCAAAACTGTAGCAGGCTAGTATTCTTGCCAACAGAAAATCATC ATTGTTTCGTTGTGTTACTTTATGGGTCCTTTACGCTGTTTTTACCTTCATAGTTCATTTACATCACCTTTTGTTCATCGTCTTCCATTTACATTTTGGA ATCGTAATACCTATGTTGATGCATGTTTCATATCAACATTCATATATACGGAACTCTTGACCAATTTTCTGATTTACTAAACTTTTCTATATGCCTAAAT TCATATGGTTTTCACACCCTTCAATTTTCTAGTTAGTAAAGCTAAATGTCTTAATTCACTTGAACTAAAATGAATATACTTTACAAGCTGCACAAATTTT CTCATTTAATCTTATAAACTTTATCTTTTGCTTTCCAATATGATTCATTCCTTTTATATATGCGGTCAGAAATTGTTTATCTGATTCAGTTATACTCTCT TTAGTGTCGGTTGCATGAGTTAGCAAACAAACGAAGAATTTCAGTAACAGGAGCCTCAAAGCTACTTGCAAATATTTTATACTCTTATCGTGGAATGGGA TTATCTGTTGGTACCATGATTGCTGGGTGGGATGAGACGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGCACTCGATTCTCTG TTGGATCTGGTTCACCATATGCTTATGGTGTACTTGACAGCGGGTACAAATATGACCTGTCAATTGAGGAAGCTTCTGAACTGGCTCGGCGAGCAATTTA TCATGCAACATTTCGCGATGGAGCTAGTGGTGGAGTTGCTAGTGTGTACTATGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGGGAA CTCCATTACCATTATTACCCAGTTACCCCAAGCACTGTTGAACAAGAAATGGCTGAGGCTCCCAGAGTTTGATGGAAATTAGACATGCGGATGTCTTCTA AGTTTCAGTTACTTGCCTGCTTTCTTAGTCAAACTAAACATGAAACTTTATTGATTTTGGATTCAGAAATTGATATTACTTTTGATCTTGATGTATATTA GATCATTAGTGCTGATACCAAAACTATTTCCCATATTCATCTCTGACCTCAAGTCTGCTTCCCCAACCCCACAAGGGAGAGCTGCACTTTTCTTAGTATT CTCTAGTGGTTAAAAACTTGAAATGCCAAATATCATTTTAAATGGGAAAGAAATGAAGGCTCTCTCTCATTCATAAAGATCTTAAAATTTTAAATAAACA AACTTATGACAATTGAAAACAAAAAATTGGGATAGAAAAAAAATAACCAAGTACAATAACAACAAAACCAGTCAGCCTGAGATTTAGAGACTGGTATTGT TATTGT
• Tissue: pods
• Gene name: LI_gene_183242;
• Additional information: details;

Expression of Ll_transcript_519491

FPKM

• PAB: 22.3
• PNAB: 22.4
• PS1: 25.8
• PS2: 14.4
• PS3: 20.9
• PW1: 13.7
• PW2: 14
• PW3: 19.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519491

• Blastp: Proteasome subunit beta type-5-A from Arabidopsis with 89.34% of identity
• Blastx: Proteasome subunit beta type-5-A from Arabidopsis with 90.13% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT1G13060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463074.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;