Ll_transcript_519502

• Id Trinity: TRINITY_DN51215_c0_g1_i26
• Name Transcript: Ll_transcript_519502
• Sequence: AAAAAATGACACGCTAGAAAACAATATTCTTATTTGAACATTGAGAATAAATGGTTTTCTAAAATGGATTGTTAAATATACTTGGGTTAGGCTGGTACAT ACCAATGATAGAGTTACCAGCCCATTGAGCCTCTTTCCTTTTCCCCAAGTCAGCAACAAATTACACACTGAAGCAAACACAGATCTCACACTGCAACCTT TCTCTCAATCGGTTTACAAACATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCCTCACAAATTGGACTTCAAAACGACATCGTTGGAAAAATTTCGG ATGCAACATCATTCGATCTTCCCAATTCAAGCGATTTTGATGGGTTTGTGAAAGAAGCTATTCAAATGGTGAAGCCTGCAAAGGGTACTACAACTCTGGC TTTTATATTTAAGGATGGTGTTATGGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGATATATATCATCTCAGTCCGTGAAGAAAATTATTGAAATCAAT CCATATATGCTTGGGACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCATAGGAATCTTGGGATTAAGGTGATGCATGTTATTTTTCGAAATTGAA TAATATCACTTTTTTGTCTGTATTATTATTCTCTTTTGCTTGGTGTATTTTACTCTTATATTATTGTATGCACATTAGTGTGGATGCTTTTCGTGAGAAA ACATATAGACTAGTAAATACTCTAATGCTGAGAATGTTACTGTATAACCATAATGGTTTTGAAGGATGCTTTTTCAAATTTGTCAGGTTTCCTGTAGACA TCAAACTACTTATAATAACTCAATTCAGATTAACCATCTTATTGATTTTGTTCCGTCAAATTTGATGGGTTTATCTTCTAGATAAAATCTACGTCACTTC AAATTCTAGAAGCTTTACAGAATGATCTTTATAGTGTGAAAGAAACATTTTAACTCACCCAAAATGGCTATGTTTGCATTGGGGAATCGGTGCATTTATG ATATCCATGTGCATCAATAAATGTGTGTTCACCGATTCGTAACATAAACTTGTCCATTTTGGCTGTTAAAATGTGCCCTTGGACACACATCAGAAAAATC CTTAAATTATTATTGTCTGCGGTTGTGGGCCTAATGGGGACATGCTAATGGCCTTGGATGCCTATCAAAACTGTAGCAGGCTAGTATTCTTGCCAACAGA AAATCATCATTGTTTCGTTGTGTTACTTTATGGGTCCTTTACGCTGTTTTTACCTTCATAGTTCATTTACATCACCTTTTGTTCATCGTCTTCCATTTAC ATTTTGGAATCGTAATACCTATGTTGATGCATGTTTCATATCAACATTCATATATACGGAACTCTTGACCAATTTTCTGATTTACTAAACTTTTCTATAT GCCTAAATTCATATGGTTTTCACACCCTTCAATTTTCTAGTTAGTAAAGCTAAATGTCTTAATTCACTTGAACTAAAATGAATATACTTTACAAGCTGCA CAAATTTTCTCATTTAATCTTATAAACTTTATCTTTTGCTTTCCAATATGATTCATTCCTTTTATATATGCGGTCAGAAATTGTTTATCTGATTCAGTTA TACTCTCTTTAGTGTCGGTTGCATGAGTTAGCAAACAAACGAAGAATTTCAGTAACAGGAGCCTCAAAGCTACTTGCAAATATTTTATACTCTTATCGTG GAATGGGATTATCTGTTGGTACCATGATTGCTGGGTGGGATGAGACGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGCACTCG ATTCTCTGTTGGATCTGGTTCACCATATGCTTATGGTGTACTTGACAGCGGGTACAAATATGACCTGTCAATTGAGGAAGCTTCTGAACTGGCTCGGCGA GCAATTTATCATGCAACATTTCGCGATGGAGCTAGTGGTGGAGTTGCTAGTGGTACGTTTTCTTTCTTCCCTATAAAGGACCTGCAGGCTGCATCTTCAT ATGTATGCTGTTGACATTTCATTTCTCCCCCTCCCACCAACTGGAAAAAAGTTAGACATGCTTGTGCATAGTAACTTATTTAATGTCTTGTGTGAGGCAC ACTTGCAATTGTGTTTGAGCACAATTATCATGTGCTTGCTCAAGACCACAACATGCATGGGTTCTATCTGTTCATGAACAAGTCATTTAAAGATTAAAAT ATAGTCTATACTTTCAAACTGGGTAGGGTGAAATGATTGAAAACATGCTTAGCGTTTAGCAATTATGCAACAATTTATACAAGTACATCATCGTAGTAAC CACCGACCAGGTCAGCATTTCCACCAGCTATTGTAGACTCATAATGAATAGCATGTATTTGTATACATGAAACCATTATCTCACTAATCTTTGGATTTAT ATGATTATAGTGTACTATGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGGGAACTCCATTACCATTATTACCCAGTTACCCCAAGCA CTGTTGAACAAGAAATGGCTGAGGCTCCCAGAGTTTGATGGAAATTAGACATGCGGATGTCTTCTAAGTTTCAGTTACTTGCCTGCTTTCTTAGTCAAAC TAAACATGAAACTTTATTGATTTTGGATTCAGAAATTGATATTACTTTTGATCTTGATGTATATTAGATCATTAGTGCTGATACCAAAACTATTTCCCAT ATTCATCTCTGACCTCAAGTCTGCTTCCCCAACCCCACAAGGGAGAGCTGCACTTTTCTTAGTATTCTCTAGTGGTTAAAAACTTGAAATGCCAAATATC ATTTTAAATGGGAAAGAAATGAAGGCTCTCTCTCATTCATAAAGATCTTAAAATTTTAAATAAACAAACTTATGACAATTGAAAACAAAAAATTGGGATA GAAAAAAAATAACCAAGTACAATAACAACAAAACCAGTCAGCCTGAGATTTAGAGACTGGTATTGTTATTGT
• Tissue: pods
• Gene name: LI_gene_183242;
• Additional information: details;

Expression of Ll_transcript_519502

FPKM

• PAB: 1.2
• PNAB: 0.6
• PS1: 0.4
• PS2: 0.2
• PS3: 0.6
• PW1: 0.3
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519502

• Blastp: Proteasome subunit beta type-5-B from Arabidopsis with 77.5% of identity
• Blastx: Proteasome subunit beta type-5-A from Arabidopsis with 93.81% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XQRP)
• Kegg: Link to kegg annotations (AT3G26340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463074.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;