Ll_transcript_519478

• Id Trinity: TRINITY_DN51215_c0_g1_i3
• Name Transcript: Ll_transcript_519478
• Sequence: AAAAAATGACACGCTAGAAAACAATATTCTTATTTGAACATTGAGAATAAATGGTTTTCTAAAATGGATTGTTAAATATACTTGGGTTAGGCTGGTACAT ACCAATGATAGAGTTACCAGCCCATTGAGCCTCTTTCCTTTTCCCCAAGTCAGCAACAAATTACACACTGAAGCAAACACAGATCTCACACTGCAACCTT TCTCTCAATCGGTTTACAAACATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCCTCACAAATTGGACTTCAAAACGACATCGTTGGAAAAATTTCGG ATGCAACATCATTCGATCTTCCCAATTCAAGCGATTTTGATGGGTTTGTGAAAGAAGCTATTCAAATGGTGAAGCCTGCAAAGGGTACTACAACTCTGGC TTTTATATTTAAGGATGGTGTTATGGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGATATATATCATCTCAGTCCGTGAAGAAAATTATTGAAATCAAT CCATATATGCTTGGGACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCATAGGAATCTTGGGATCAAGTGTCGGTTGCATGAGTTAGCAAACAAAC GGAGAATTTCGGTGACTGGAGCCTCAAAGCTACTTGCAAATATTTTATACTCTTATCGTGGAATGGGATTATCTGTTGGTACCATGATTGCTGGATGGGA TGAGACGGGTCCTGGTCTGTATTATGTTGATAGCGAAGGAGGAAGACTAAAAGGGACTCGATTCTCTGTTGGATCTGGTTCACCATATGCATATGGTGTA TTGGACAGCGGATACAAGTATGACTTGTCAATTGAGGAAGCTGCTGAACTGGCTCGACGAGCAATTTATCATGCAACATTTCGTGATGGAGCTAGTGGTG GTGTTGCTAGTGTGTACTATGTCGGACCAAATGGATGGAAGAAATTGTCGGGTGATGATGTCGGGGAACTCCATTACCATTACTACCCAGTTATCCCAAG CACTATCGAACAAGAAATGGCTGAGGCTCCTGGAGCTTGATGGAAATTAGCCGTGCGGATGTCTTCTAAGTTTCCATTGCTTGCTATCTTAGTGTCAACT GAGGTCAGTTATTTGCCAAGGACAAAGAAGTGGGGCAATGAGGGTCTCCATTGCTTGATGCAGCAGAAACGGGGAAGAGTTTCACATTATTTCTCGTACC TAAAACAATACCTATATTTTCTCATATTTTTCTTTATAACCTTTTTTCCTCTTCCATTTTTTCACTCCAACCAAAAAAGTGAGCAGTGTAACGATATTTA CATGTCTATTATTGAAAAATATCACTATAAACACGAAGGTTTGGACCCATGTTTTGTAATACATGGAAAATCCAAACTCAAGTGATGTAAGCTTGACATT AATACCTCATGAATGACTCATGTATACTTATAGTGTAAAACATTATTTCC
• Tissue: pods
• Gene name: LI_gene_183242;
• Additional information: details;

Expression of Ll_transcript_519478

FPKM

• PAB: 1.4
• PNAB: 1.3
• PS1: 1.9
• PS2: 0.6
• PS3: 1.1
• PW1: 1.3
• PW2: 1.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519478

• Blastp: Proteasome subunit beta type-5 from Spinacia with 83.09% of identity
• Blastx: Proteasome subunit beta type-5 from Spinacia with 83.09% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457569.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;