Ll_transcript_519479

• Id Trinity: TRINITY_DN51215_c0_g1_i4
• Name Transcript: Ll_transcript_519479
• Sequence: ATCGGTATTTCACCTTTTCTTTCTCCCCAATCTAATATTTTGTTATTTACGGAAATAATATTTTTTATTTTTATAAAAAAAAATGATTTTTTTTCCTGGT TAGGTTTACAAACATGAAGCTTGATACCAGTGGTCTTGAATCATTCTCCTCACAAATTGGACTTCAAAACGACATCGTTGGAAAAATTTCGGATGCAACA TCATTCGATCTTCCCAATTCAAGCGATTTTGATGGGTTTGTGAAAGAAGCTATTCAAATGGTGAAGCCTGCAAAGGGTACTACAACTCTGGCTTTTATAT TTAAGGATGGTGTTATGGTAGCTGCTGATTCTCGTGCTAGTATGGGTGGATATATATCATCTCAGTCCGTGAAGAAAATTATTGAAATCAATCCATATAT GCTTGGGACGATGGCCGGAGGAGCTGCTGATTGCCAATTTTGGCATAGGAATCTTGGGATTAAGGTGATGCATGTTATTTTTCGAAATTGAATAATATCA CTTTTTTGTCTGTATTATTATTCTCTTTTGCTTGGTGTATTTTACTCTTATATTATTGTATGCACATTAGTGTGGATGCTTTTCGTGAGAAAACATATAG ACTAGTAAATACTCTAATGCTGAGAATGTTACTGTATAACCATAATGGTTTTGAAGGATGCTTTTTCAAATTTGTCAGGTTTCCTGTAGACATCAAACTA CTTATAATAACTCAATTCAGATTAACCATCTTATTGATTTTGTTCCGTCAAATTTGATGGGTTTATCTTCTAGATAAAATCTACGTCACTTCAAATTCTA GAAGCTTTACAGAATGATCTTTATAGTGTGAAAGAAACATTTTAACTCACCCAAAATGGCTATGTTTGCATTGGGGAATCGGTGCATTTATGATATCCAT GTGCATCAATAAATGTGTGTTCACCGATTCGTAACATAAACTTGTCCATTTTGGCTGTTAAAATGTGCCCTTGGACACACATCAGAAAAATCCTTAAATT ATTATTGTCTGCGGTTGTGGGCCTAATGGGGACATGCTAATGGCCTTGGATGCCTATCAAAACTGTAGCAGGCTAGTATTCTTGCCAACAGAAAATCATC ATTGTTTCGTTGTGTTACTTTATGGGTCCTTTACGCTGTTTTTACCTTCATAGTTCATTTACATCACCTTTTGTTCATCGTCTTCCATTTACATTTTGGA ATCGTAATACCTATGTTGATGCATGTTTCATATCAACATTCATATATACGGAACTCTTGACCAATTTTCTGATTTACTAAACTTTTCTATATGCCTAAAT TCATATGGTTTTCACACCCTTCAATTTTCTAGTTAGTAAAGCTAAATGTCTTAATTCACTTGAACTAAAATGAATATACTTTACAAGCTGCACAAATTTT CTCATTTAATCTTATAAACTTTATCTTTTGCTTTCCAATATGATTCATTCCTTTTATATATGCGGTCAGAAATTGTTTATCTGATTCAGTTATACTCTCT TTAGTGTCGGTTGCATGAGTTAGCAAACAAACGAAGAATTTCAGTAACAGGAGCCTCAAAGCTACTTGCAAATATTTTATACTCTTATCGTGGAATGGGA TTATCTGTTGGTACCATGATTGCTGGATGGGATGAGACGGGTCCTGGTCTGTATTATGTTGATAGTGAAGGAGGAAGACTGAAAGGTACTCGGTTCTCTG TTGGATCGGGTTCACCATATGCTTATGGTGTATTGGACAGCGGATACAAGTATGACATGTCAATTGAGGAAGCTTCTGAACTGGCTCGACGAGCAATTTA TCATGCAACATTTCGTGACGGAGCTAGTGGTGGAGTTGCTAGTGTGTACTATGTTGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGTGAA CTCCATTACCATTACTACCCAGTTATCCCAAGCACTGTGGAACAAGAAATGACCGAGGCTCCCGGAGCTTGATGAAAATTAGTCATGGATGTCTTCTGAG TTTCTATTACTTTGCTTCCTTAGATTCAATGGGCTATGAAATTGTATTGTTTTGGATTCGAATATTGACATTGCTTTAATTTTGATGTATATTAGATTAT TAGTGCTGATACCATACCACATTTACCATGACTCTAATGTATCTATTGTCCATGTAAAGTTTTTATGTTCTTGTTGCATTATCCATCATTTACGAATATT ATTTTTATTTAATGGG
• Tissue: pods
• Gene name: LI_gene_183242;
• Additional information: details;

Expression of Ll_transcript_519479

FPKM

• PAB: 11.6
• PNAB: 11.5
• PS1: 15.7
• PS2: 6.6
• PS3: 13.7
• PW1: 6.3
• PW2: 11.7
• PW3: 12.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519479

• Blastp: Proteasome subunit beta type-5 from Spinacia with 85.6% of identity
• Blastx: Proteasome subunit beta type-5 from Spinacia with 87.74% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457569.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;