| Id Trinity | TRINITY_DN51228_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_516860 |
| Sequence | CAGTTAGTGTAGAATTGCAGAAGATTTTGGTTCTGACAGAGAGCTTTCCTCTTTGTAAGTTGAAAGGACTAATCATCAAATCCCAACAAAGATTCATAGA TATATGATAGATCTCATCATCTTAAACATGTGTGTTGTGACAGGTGAGTTTATGTGATGCATCTATATGTCCTTGCTTTGATGTTATATATGTTGTATGT TACATAACTAACTGTTATTGCTTTGGTGGGTGAGACTAAACTGTGCGTGTGTTTCTTTGTCTATGTCTCTCTCTCTCTCTCTCTCTTTATCTATCTCTTT TGTGTGTCTAAATATCCATTCTTCATATGTTTTGGGTCATTGTAATTGAAATTCTCTTTTTCTTTGCAGTTCAGTGATGTTTATGAAGCACGTGTACACT CTTATATCCCTCTCACTATACCATTTCATTCACTATCATAAAAATAATATGAACCTCTCCATTTTCAACTTCACTATCTACACTTCTTCACATATTTCCT TTGTTCCTGATTCTCTTTCAATTTTTCTCTCTAAGCTCATGGGTTAATTAGGAAGATGGGATTAGTTGATTAATTATGAAAATCCACTCATAAAGTAAAA CTAATAATTCCATTTCATCTATAATTTAATTAGAAATAAGTGAAACATGAAATCAAAATCAAACATATTTTTATAATTTTTCAATTTCATTGTTTATTTC CTCAGGATCATTATTTTGAGAAGACTATATCACCGTCTGGAGAGATATTGAGATCAATTAAGCATCAATAATTGAGAAACTTTTGATGGGTTGATCCACA AATCATACCAAGATAATTTATCACAAAGTTGAAGTGAAGTAACCAACACATTCTTTTACTCAAAATCGATGGGGACATACTATCATGGTAATTCTGAAAT CCAAGGTGCTAATGCTGATGGACTTCAAACACTCGTGCTCATGAATCCTGGTTATATCCACTACTCTGACGCGCCGCCACAGACGCCACTTTCTCACGGC CCCGGCAACCATGTTTTCCTCAACAATAATAATAACAACAACTTCAACCCTCACGCGCCACCACCCTCTCACCACACACAACAATTTGTTGGCATCCCTC TCTCCGCCACAGCTGCATCCTCGCAAGACCTTAACCACCACCACGACCACAACTCCTTGCACCCCCACCACCATGATGTGTCAGCCTTGCATGGCTTCAT GGCGCCTCGCATGCAGTACAACCTTTGGAACACAATTGACCCGAACTCGACGGCGCGTGAAACTCCACGCGCTCAGCAGGGGCTGTCCCTGAGTCTTTCT TCCCAGCAGGCTGGGTTCGGGTCCTTCCTGGTAGACCGTGAGGTCCCACCAACGCAGGGTCAGCCGGCAGCTATGTCCAGCGACGATATTCGCGGCGGCT CGCCCTCACCGGGAGCCATAAATGGTAGTGCTACAGGCATTCAGAGTGTGCTATTGAGTTCAAAGTATTTGAATGCAGCACATGAGCTGTTGGATGAGGT GGTGAATGTGAATAATGGTATTAATAGTGAATTATTGGCAAAGAAGAATGGTGGTGGTGGTGGGAACAAGGTGATTGGAGAGTGTTCTGGAGCAGTTAGT GGAGAAGGTGGTGGTTCAATTGGTGGAGAGAATAGTGGGAAACGTAGCTGTGATTTATCAAATGCAGAAAGACAAGAAATTCAGATGAAGAAAGCTAAGT TAATCAGCATGCTTGATGAGGTGGAACAAAGGTATAGACAATACCATCACCAAATGGAGATTGTAGTTTCCTCATTTGAACAAGCTGCAGGGATTGAATC AGCGAGAACTTACACTTCTCTTGCATTGCAAACAATTTCGAGGCAATTTCGATGTTTGAAAGATGCCATAACATGTCAAATTCGAGCCGCGAATAAGAGC TTAGGAGAAGAAGATTGCTTTGGAGGTAAAATTGAAGGTTCTAGGCTCAAATATGTAGACAATCATCTAAGGCAACAAAGAGCTCTTCAACAATTGGGTA TGATCCAACACAATGCTTGGAGACCCCAGAGAGGCTTGCCAGAAAGATCAGTTTCTGTTCTTCGTGCTTGGCTCTTCGAACATTTTCTCCATCCCTATCC CAAGGATTCAGACAAACAAATGCTTGCAAAACAAACAGGACTTACCAGGAGCCAGGTTTCGAATTGGTTTATAAATGCTCGAGTTCGGCTATGGAAGCCG ATGGTAGAAGAAATGTACATGGAGGAAATGAAAGAGAATGAACAGAACAATGGTTCTGAGGACAAATCAAGCAAGAGCAATGAAGACAAAGGACCAAACA ATGAAAATGAACCAAAAAACTTCAATACCAAACATGTTTCTAAGAGCCAGAACACTACATTAGTTTCAGTTGCTAGACCAACAACATCAGCAGTTGAGGA AAGTGTTAGAAACCAATCAGGACTTAGCTTCAATATTGGGTCGTCAGAGCTAGATGGTATCACACAACAAAGTCCTAAGAAACCAAGGAACCATGAAATT ATGCATTCACCACATAATGTTCCTTCAATGAACATGGATATCAAACCCAGTGAGCATATTTCAATGAAATTTGGTGTTGAGAGACAAGGCAGAGATGAGT ACTCTTTTATGGGAAACCAAACAAACTTCATTGGTGGGTTTGGACAATACCCTATTGGAGATATTGGTAGGTTTGATGCAGAACAGTTTACACCAAGGTT TCAAGGTAATGGTGTTTCACTCACACTTGGTCTTGATTCCTTACCAGGAACACATCAAAATTTTCTACAAAACCAAAGCATTCAACTTGGAAGAAGCATG GATATTAGTGAACCAAATGAGTTTGGTGCAATGAACACTTCCCCTTCTCATTCTAATGCTGCATTTGAGAATATCAACATGCAAAACCCAAAGAGGTTTG AAGCACAATTGTTGCCAGATTTTGTGGCCTAAATAAGACATTGTTGAAGTGTGAGCAAATGTGGTAGCACACACTTTTTATGGGTTGCTCACAATTTCTT CCAAGCTCCTTGATTATGTTGGGGAGTGATGGAAAATTGTAGTGTAAAGAAAGAATGAATTTTACATTAGTATAGATTTATACCATGCATAGAACCATTT GAAGTTCCTAGATAGAAAGGTTAGGGGATTTGAGAGTATATGGTTGAGGTTGTATATTATTTTTGCAAATTCTGAAGGTGGGATACATGGGTTTATGTTA TAAAGCTTAATTTGGTAAAGACCAATATATCTTTGATTGGAAATATATGTTCTGGTATTATGCATTCTCCATTTATTTTTGTTTTAAGAAAGATCCACCA TGGTAGCGGTTTAAAGCCTATGAACAATCTGAAAAAATTGTAATGAATGAAAGTAAAATCTCCAAGAGTTCAACTATTTCCCTTTGATTAATATTGCTGC TTTGCCCCATGATAATTTCTGGTTAAAGTTGTTCCCGGGGTTATTGGGTGAGTTTGATTTTGGAAGGGAAATAAGGGAACTAAAAAACTTAGGAACCATG A BLAST |
| Tissue | pods |
| Gene name | LI_gene_183336; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516860
| Blastp | BEL1-like homeodomain protein 1 from Arabidopsis with 48.53% of identity |
|---|---|
| Blastx | BEL1-like homeodomain protein 1 from Arabidopsis with 47.79% of identity |
| Eggnog | homeobox(ENOG410XPMQ) |
| Kegg | Link to kegg annotations (AT2G35940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425750.1) |
| Pfam | Associated with HOX (PF07526.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |