| Id Trinity | TRINITY_DN51232_c0_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_517977 |
| Sequence | AATGACATGACAACCTTGGAAGTAAAGTCAAAACTCCATTTCCATTTATTGTGGCCATAAAAAACGATCAATGCTCCATTTCCATTTATTCCTGTCTCTG CTACACGCACGCTACAACACAAAACCATTCACTAACAAAACCACCAACGCCATCGATTCCCATTTTCTCTCTCAACATCTTAAAACTTTACTATCACTCA TCACCCTTATTGAAAAAAAAAAAACATTTTTTTTTCATTTTTATTTGGCACATCGTCGAGGGTCATCGTCAAGTTCATTCCTTTGTGTCTAATATTGCGA ATTAGGGTCTTATAGAGAGATGGGTAGCCCTAAAAAGAATGAAAATAAGGGCTTTTTCGCTGCCATGAGTTCTGGAATATCCATCTTCAGCAGCGCAATG CATCGATCTGTCAATGGTATCAGCAAAACACTAGTATGATACATCTCAAGTGCACAGATAAGCAAGCATGCATTTGAGGTTTCTAGGATATGAAGGGGTA GAAGTCATAAATCCCGATGGAGGTAAAGATGATGCAGAAGAGGAAGCTCAGAGAGGAAGATGGAAACAGGAGGAAAGAGATGGTTACTGGAAGATGATGC ACAAATATATTGGCTCAGATGTAACATCAATGGTAACGCTACCGGTTATTATTTTTGAACCAATGACTATGCTTCAAAAGATGGCAGAGTTAATGGAGTA CTCCTACTTGTTAGATCGGGCAGATGAATGTGAGGATCCACACATGCGGCTGGTGTATGCATCATCTTGGGCAATATCTGTCTACTATGCATACCAACGG ACCTGGAAGCCTTTTAATCCTATTCTCGGAGAGACTTATGAAATGGCTAACCATGGTGGAATTTCATTCCTTGCAGAACAGGTGAGTCATCACCCCCCTA TGAGTTCTGGACATGCCGAGAATGAGCATTTTGCATATGACGTGACTTCAAAGTTAAAAACTAAGTTTCTGGGAAACTCTGTTGATGTTTACCCTGTTGG AAGAACACGTGTAACCCTTAAGAGGGATGGTGTAATCTTGGATTTGGTGCCACCTCCGACAAAGGTTAATAACTTGATTTTCGGCAGAACTTGGGTTGAT TCACCTGGGGATATGATAATGGCGAATTTGACAACTGGGGACAAAGTTGTACTATACTTCCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAG ATGGATATGTATATAATTCTGACGAGGAGCCTAAAATATTGATGACCGGGAAGTGGAATGAGTCAATGAGTTATCAGCCTTGTGATTTGGAAGGAGAGCC TCTTCCAGACACAGAATTGACAGAGGTTTGGCATGTCGCTGATGTTCCGAAGAATGATAAATTCCAGTATACATATTTTGCGCATAAAATAAACAGCTTT GATACTGCCCCTAGAAAATTGTTGGCATCAGACTCTCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTGATATGTCCAAAGCTGGTGCAGAAAAAA GCAGGTTAGAGGAGATGCAGCGCGCCGAAAAAAGAACAAGAGAGGCCAAAGGGCATAACTTCACACCAAGATGGTTTGATTTAACAGAAGAAGTGACATC AACTCCTTGGGGTGATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_183358; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517977
| Blastp | Oxysterol-binding protein-related protein 3C from Arabidopsis with 84.88% of identity |
|---|---|
| Blastx | Oxysterol-binding protein-related protein 3C from Arabidopsis with 84.88% of identity |
| Eggnog | Oxysterol-binding protein(ENOG410XP9E) |
| Kegg | Link to kegg annotations (AT5G59420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447956.1) |
| Pfam | Oxysterol-binding protein (PF01237.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |