Id Trinity | TRINITY_DN51234_c0_g1_i12 |
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Name Transcript | Ll_transcript_517435 |
Sequence | TTTCTTTTTGTTAAGTTGCAATTTTTGCTTGGAAGAAGGTTCCTTTTTTTAGTAAAACCGTGACCTAGATGTCACCGGCTCAAATTCTACACGCAGTCTC TCCACTTGTAGGGGATAGGATGCGTATATTTACCTTCTCCAAAGTCTAAACCCTAGCTATCAGATGGAAGCCTCGAGTATTGGGCTGTTGATTATAATAT AATTGCAACCAAAAAGACTAATATGTGATGCCGAAGTGGTTCTAGTTGTGCTCAGTATGTTTTTTGAGCAAAGAAGTGATAGCCTTGAAGAGAAAATAGT GATTCAAACATTAGTTCATCATTTATTTGTTAGGGAGTGCTGACTGAGACAACAGCAGAGCTAGCAGCTTCACTGTCTTTATCGGCTGCAAGAAGGATAG TTGAGGCCGATGAGTTCATGAGGGCAGGACTATATGATGGATGGCTACCTCATCTGTATGAAAACTATTAATATGCTTATCTTGCTTCATTCTATTAGCA ATAATGTTAAAACCATGGAATGACTGCTTTGGTTTTGGTTCTGGTAGATTTGTTGGAAACCTGCTGAAAGGACAGACGGTTGGCGTTATTGGAGCCGGCC GAATTGGATCAGCTTATGCAAGAATGATGGTTGAAGGCTTCAAGATGAACCTAATTTACTTCGATCTCTACCAGGCGACTCGACTCGAAAAGTTTGTTAC AGCTTATGCTGAATTCCTGAAAGCAAATGGTGAACAACCCGTGACTTGGAAAAGAGCAGCATCCATGGATGAGGTCCTCCAAGAGGCAGATTTAATTAGT CTTCATCCTGTCTTGGATAAAACCACATATCATCTTGTCAACAAGGAAAGACTCTCTAAGATGAAGAAGGAAGCAATTCTTATAAACTGCAGTAGAGGGC CTGTTGTTGATGAAGTTGCACTTGTGGAGCATTTAAGACAGAACCCAATGTTTCGCGTAGGCCTCGATGTGTTTGAGGACGAGCCGAACATGAAACCCGA GC BLAST |
Tissue | pods |
Gene name | LI_gene_183362; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517435
Blastp | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 90% of identity |
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Blastx | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 90% of identity |
Eggnog | Dehydrogenase(COG1052) |
Kegg | Link to kegg annotations (AT1G68010) |
CantataDB | Link to cantataDB annotations (CNT0001136) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428193.1) |
Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |