| Id Trinity | TRINITY_DN51234_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_517438 |
| Sequence | GTGAAAGACCAAACTCAAAATTTCAGTGTACTGTGTTTCACTTCAACTTTCTACTTAAACTAACCTTCCAAAGGTAACAGTGTTGTTGTTGTTGTTGTCT TCATGGCCAAGCCAGTGTCCATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTGAGCACAAAACCAATGCCAGGAACTCGTTGGATCAATCTTCT AGTCCAACAAGATTGTCGTGTTGAAATATGCACTGAGAAGAAAACTATTCTGTCAGTTGAAGACATTATTGCTTTGATTGGTGATAAGTGCGATGGAGTT ATAGGACAGTTGACTGAAGACTGGGGAGAAAAGTTATTCTCTGCCTTGAGCAAAGCTGGAGGCAAAGCTTTCAGTAACATGGCAGTTGGTTACAATAATG TGGATATCAATGCTGCAAACAAATATGGTGTTGCTGTTGGAAATACTCCTGTAAGCTATCTCTTTCATATTGCAATTTATATATTAAATGCATGTCACTT TTCTTTTTGTTAAGCTGCAATTTTTGCTTGGAAGAAGGTTCCTTTTTTTAGTAAAACCGTGACCTAGATGTCACCGGCTCAAATTCTACACGCAGTCTCT CCACTTGTAGGGGATAGGATGCGTATATTTACCTTCTCCAAAGTCTAAACCCTAGCTATCAGATGGAAGCCTCGAGTATTGGGCTGTTGATTATAATATA ATTGCAACCAAAAAGACTAATATGTGATGCCGAAGTGGTTCTAGTTGTGCTCAGTATGTTTTTTGAGCAAAGAAGTGATAGCCTTGAAGAGAAAATAGTG ATTCAAACATTAGTTCATCATTTATTTGTTAGGGAGTGCTGACTGAGACAACAGCAGAGCTAGCAGCTTCACTGTCTTTATCGGCTGCAAGAAGGATAGT TGAGGCCGATGAGTTCATGAGGGCAGGACTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACCTGCTGAAAGGACAGACGGTTGGCGTTATTGGA GCCGGCCGAATTGGATCAGCTTATGCAAGAATGATGGTTGAAGGCTTCAAGATGAACCTAATTTACTTCGATCTCTACCAGGCGACTCGACTCGAAAAGT TTGTTACAGCTTATGCTGAATTCTTGAAAGCAAATGGTGAACAACCAGTAACTTGGAAAAGGGCATCAACCATGGATGAGGTCCTCCAGGAAGCAGATCT AATCAGTCTTCATCCTATCTTGGACAAAACCACTTATCATCTCGTCAACAAGGAAAGACTCGCCAAGATGAAGAAGGAAGCAATTCTTATAAACTGCAGC AGAGGGCCTGTTGTCGATGAAGTTGCGCTTGTAGAGCATTTACGACAGAATCCAATGTTTCGAGTAGGCCTTGATGTGTTTGAGGATGAGCCCTACATGA AACCTGGGCTCGCAGAGTTGAAGAATGCCATTGTGGTACCTCATATTGCATCTGCCTCCAAGTGGACCCGCGAGGGAATGGCCACATTAGCAGCTCTAAA TGTGCTGGGAAAAATTAAAGGGTACCCAGTTTGGTTTGATGGCAATAGGGTGGAACAATTCCTTGATGAGAATGCTCCACCTCCAGCTGCAAGCCCAAGC ATAGTTAATGCAAAAGCCCTTGGTTTGCCAGTTTCAAAGCTATAGGCATATATGTGCTTTTGATCTACAAGGGCCTTCAATTGCAAAAATGTCCATTTTT TTGTGTGGAGTTGAACTCTGGTGTCATTGAAATATGGAATACCTAAGGAAAGTCTATGTCCTTGTGTTGTGTATGCAGAGAGTGCCTGTGGGAGTGTATC AGAATAAATACTGTCACCTTGATATTAGTATAATGTACTTGAAATATTAATTAAACTTCAAACAATGAACTTATACATGAGAATTCATCTCATTAAAATC CATCTCAAGAGAAAATTCAGCCATGTTTGAATATATTCCTCTTTATCTTAAGGCCTATTTAGGGAGATTCCATAATAATTCCTTGAGGCTAGCTCCTATT CATGTATAGACCTGAGTTCCTTATTAAAATACCATCAACTCAATATTGTTGGGATAATAAGATACATCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_183362; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517438
| Blastp | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 87.6% of identity |
|---|---|
| Blastx | Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 88.05% of identity |
| Eggnog | Dehydrogenase(COG1052) |
| Kegg | Link to kegg annotations (AT1G68010) |
| CantataDB | Link to cantataDB annotations (CNT0001136) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452618.1) |
| Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |