Ll_transcript_517423

• Id Trinity: TRINITY_DN51234_c0_g1_i2
• Name Transcript: Ll_transcript_517423
• Sequence: GTGAAAGACCAAACTCAAAATTTCAGTGTACTGTGTTTCACTTCAACTTTCTACTTAAACTAACCTTCCAAAGGTAACAGTGTTGTTGTTGTTGTTGTCT TCATGGCCAAGCCAGTGTCCATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTGAGCACAAAACCAATGCCAGGAACTCGTTGGATCAATCTTCT AGTCCAACAAGATTGTCGTGTTGAAATATGCACTGAGAAGAAAACTATTCTGTCAGTTGAAGACATTATTGCTTTGATTGGTGATAAGTGCGATGGAGTT ATAGGACAGTTGACTGAAGACTGGGGAGAAAAGTTATTCTCTGCCTTGAGCAAAGCTGGAGGCAAAGCTTTCAGTAACATGGCAGTTGGTTACAATAATG TGGATATCAATGCTGCAAACAAATATGGTGTTGCTGTTGGAAATACTCCTGGAGTGCTGACTGAGACAACAGCAGAGCTAGCAGCTTCACTGTCTTTATC GGCTGCAAGAAGGATAGTTGAGGCCGATGAGTTCATGAGGGCAGGACTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACCTGCTGAAAGGACAG ACGGTTGGCGTTATTGGAGCCGGCCGAATTGGATCAGCTTATGCAAGAATGATGGTTGAAGGCTTCAAGATGAACCTAATTTACTTCGATCTCTACCAGG CGACTCGACTCGAAAAGTTTGTTACAGCTTATGCTGAATTCTTGAAAGCAAATGGTGAACAACCAGTAACTTGGAAAAGGGCATCAACCATGGATGAGGT CCTCCAGGAAGCAGATCTAATCAGTCTTCATCCTATCTTGGACAAAACCACTTATCATCTCGTCAACAAGGAAAGACTCGCCAAGATGAAGAAGGAAGCA ATTCTTATAAACTGCAGCAGAGGGCCTGTTGTCGATGAAGTTGCGCTTGTAGAGCATTTACGACAGAATCCAATGTTTCGAGTAGGCCTTGATGTGTTTG AGGTAACTGAACCTTCCCTATCCCGGAATGCTAGAACTTGTTAATCTACCTTTTAAAGTCTCTATATGATTTAATTTTTCTTAGGATGAGCCCTACATGA AACCTGGGCTCGCAGAGTTGAAGAATGCCATTGTGGTACCTCATATTGCATCTGCCTCCAAGTGGACCCGCGAGGGAATGGCCACATTAGCAGCTCTAAA TGTGCTGGGAAAAATTAAAGGGTACCCAGTTTGGTTTGATGGCAATAGGGTGGAACAATTCCTTGATGAGAATGCTCCACCTCCAGCTGCAAGCCCAAGC ATAGTTAATGCAAAAGCCCTTGGTTTGCCAGTTTCAAAGCTATAGGCATATATGTGCTTTTGATCTACAAGGGCCTTCAATTGCAAAAATGTCCATTTTT TTGTGTGGAGTTGAACTCTGGTGTCATTGAAATATGGAATACCTAAGGAAAGTCTATGTCCTTGTGTTGTGTATGCAGAGAGTGCCTGTGGGAGTGTATC AGAATAAATACTGTCACCTTGATATTAGTATAATGTACTTGAAATATTAATTAAACTTCAAACAATGAACTTATACATGAGAATTCATCTCATTAAAATC CATCTCAAGAGAAAATTCAGCCATGTTTGAATATATTCCTCTTTATCTTAAGGCCTATTTAGGGAGATTCCATAATAATTCCTTGAGGCTAGCTCCTATT CATGTATAGACCTGAGTTCCTTATTAAAATACCATCAACTCAATATTGTTGGGATAATAAGATACATCG
• Tissue: pods
• Gene name: LI_gene_183362;
• Additional information: details;

Expression of Ll_transcript_517423

FPKM

• PAB: 1.2
• PNAB: 1.8
• PS1: 1
• PS2: 0.4
• PS3: 0.5
• PW1: 0.8
• PW2: 1.3
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517423

• Blastp: Glycerate dehydrogenase from Cucumis with 89.87% of identity
• Blastx: Glycerate dehydrogenase from Cucumis with 89.87% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (101209132)
• CantataDB: Link to cantataDB annotations (CNT0001136)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452618.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (PF00389.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;