Ll_transcript_517428

• Id Trinity: TRINITY_DN51234_c0_g1_i6
• Name Transcript: Ll_transcript_517428
• Sequence: GTGAAAGACCAAACTCAAAATTTCAGTGTACTGTGTTTCACTTCAACTTTCTACTTAAACTAACCTTCCAAAGGTAACAGTGTTGTTGTTGTTGTTGTCT TCATGGCCAAGCCAGTGTCCATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTGAGCACAAAACCAATGCCAGGAACTCGTTGGATCAATCTTCT AGTCCACCAAGATTGTCGTGTTGAAATATGTACAGAGAAGAAAACTATTCTGTCAGTTGAGGATATCATGGCTTTGATTGGTGATAAGTGTGATGGAGTT ATAGGGCAGTTGACTGAAGAATGGGGAGAAGAGTTGTTCTCTGCCTTGAGCAAAGCAGGAGGGAAAGCTTTCAGTAACATGGCTGTTGGCTACAATAATG TGGATGTCAATGCTGCAAATAAGTATGGTGTTGCTGTTGGAAATACTCCTGTAAGCTACCTCTTCCAAAATTACATTTTCAATCTTAAATCCATGTGATT TTTCTTTTGGTAAAGTTGGCATTTATGATAGGAAGGGTTTTATTTATTCCATTTATCATAGTTGGTACCACAAAATTTGCAAGTATGCATGTGTTAGTGT GTGTAATGCTAATGTGGGTTTAGTTGCATTTGGATCCTATAAGGTGATATGTCTCTAAAGGGAGAAAGTAGGGTGTATCTACCCTTGATTTGATAAAGTG TATTGTGATTCTAATCCTCTAAATGACTTAAGGTTGAATATAACTTTACTTTCTTAATCCGGAGACGATCTTACTGTAGAGTTTAGAGTATCCAAATCCG GTTCAGGTATGTTGAGTATATTCTATGAGCTTCCAATTCTATGTTTTAATAAGAGTTCATTCATTATTTGGTAGGGAGTGCTGACTGAGACAACAGCAGA GCTGGCAGCTTCACTGTCTTTAGCAGCTGCAAGAAGGATAGTCGAGGCAGATGAGTTCATGAGAGCTGGATTATATGATGGATGGCTACCTCATCTGTAT AACAACTACTAATATTCCACTCTTCTTTCGTTCAATACTACTAACAATGCTTTATACTATAAATTTTAGTTCTTTTCTGATCTTCATACACTAAATTCAG TAAATTGTAATGCAAGTGACATACTTCTGGTTGTTGGAATGACTGCTTCCAATTTGTTTTTTCGACAGATTTGTTGGAAACCTGCTGAAAGGACAAACAG TTGGCGTTATTGGAGCTGGCCGTATTGGATCAGCTTATGCTAGAATGATGGTTGAAGGGTTCAAGATGAACCTAATTTACTTCGATCTCTATCAGGCTAC TCGGCTAGAAAAGTTTGTTACAGCTTATGCCGACTTCTTGAAAGCAAATGGTGAACAACCGGTGACTTGGAAAAGGGCAGCATCCATGGATGAGGTCCTC CAGGAAGCAGATCTAATTAGTCTTCATCCTGTCTTGGATAAAACCACTTATCATCTAGTGAACAAGGAAAGACTCTCCAAGATGAAGAAGGAAGCAATTC TTATAAACTGCAGTAGAGGGCCTGTTGTTGATGAAGTTGCACTTGTCGAGCATTTAAGGCAGAATCCAATGTTTCGAGCAGGACTTGATGTGTTTGAGGA TGAGCCCAACATGAAACCTGGGCTAGCAGAGTTGAAGAATGCTGTTGTGGTACCTCACATTGCATCTGCCTCCAAGTGGACCCGGGAGGGAATGGCCACA TTAGCAGCTCTAAATGTGCTGGGAAAGATTAAAGGGTATCCAGTTTGGTTTGATGCCAATAGGGTGGAACCATTCCTTAATGAAAATGTTCCACCTCCAG CTGCAAGCCCAAGCATTGTTAATGCAAAAGACCTTGGCTTGCCAGTTTCACAGGTATAGGCTGCATACACTTACCCCTACCCTATAAGGGCCTGCAATTG CAAAAACAACAATGTTTTTGTGTGTTGAGTTGGATTTGGTTACATGGAATATGAAATAGCCAAGGAGAGTCTATGCCCTTGTGTATGTAAAGTATTATGA GAATAAATACTGTCACCTTAATAATAGTATCAAATGCTTGTAATGTACTTGAAATGTTAAATGAACATAAATGAACTTATACCTCAGAATTCATCCCTAT AAAACTCACATACTCAATTCCCATTATCCAATCCTTATTGTGATATTGAGTAGACATGTCAAACCATCTCTCTAGTTGGTGCATTGGCC
• Tissue: pods
• Gene name: LI_gene_183362;
• Additional information: details;

Expression of Ll_transcript_517428

FPKM

• PAB: 0.5
• PNAB: 0.5
• PS1: 0.1
• PS2: 0
• PS3: 0.5
• PW1: 0.5
• PW2: 1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517428

• Blastp: Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 84.31% of identity
• Blastx: Glycerate dehydrogenase HPR, peroxisomal from Arabidopsis with 86.03% of identity
• Eggnog: Dehydrogenase(COG1052)
• Kegg: Link to kegg annotations (AT1G68010)
• CantataDB: Link to cantataDB annotations (CNT0001136)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428193.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;