Ll_transcript_517407

• Id Trinity: TRINITY_DN51235_c0_g1_i6
• Name Transcript: Ll_transcript_517407
• Sequence: CAAGGACCGCATGCCCACAGAACCTCAAGCCGACAAAAAACTGATGCAGTCCCACAAGTCTGTACATGAAATCATGAATATAAACACCTAGATTAATTTA CAACCCTACCCCTCAGTTGTGGCATTCAAATTTAAACCCTTAAAAAAAGACGCAAGCCGAGGTACATAACATTGAACCTCATAACTGGTACTTTGGTGCT GCAACAACAAAAACAATGGCTCAGTTGAAGACATTTCCTTCTTCATATTCTTACCCTGCAACTTCTCCTTCCCTACACAGAACAGAACAGGTTCTGCATC ACCAGATCTGGAAGGAAAATCCATCATCATTCAAAAATTTGGGGACAAGAACAACTAATGGTGCTGGTAAATTTCAAGTTATAAGAGCAGTGGTAAGCAG TGATACAGAAACAGAAATTTCTGAATCCAAAAAGGTTAGCGGGCTACGTGGAAAATTAAATAAGGTTGTCTTGGCTTACAGTGGTGGCTTAGACACATCA GTCATTGTCCCATGGCTGAGAGAGAATTATGGCTGTGACGTTGTTTGCTTCACAGCTGATGTTGGCCAAGGTATAAAAGAACTGGATGGTTTAGAAGCCA AAGCCAAAGCTAGTGGGGCCTCTCAGTTAGTGGTAAAGAACTTGAGGGAGGAATTTGTTCGCGATTATATATTCCCTTGTCTGCGTGCTGGTGCAGTTTA TGAAAGGAAGTATTTGCTTGGCACTTCAATGGCCCGGCCTGTTATTGCAAAGGCCATGGTTGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTCTCCCAT GGGTGTACAGGGAAAGGAAATGATCAGGTTCGATTTGAGCTCACTTTCTTTGCACTAAACCCCAAGCTTAATGTCGTGGCTCCATGGAGAGAGTGGGATA TTACTGGGAGAGAAGATGCTATTGAGTATGCTAAAAAGCATAATGTACCTGTTCCTGTAACAAAGAAATCCATATATAGCAGAGACAGGAACCTCTGGCA CCTTAGTCATGAGGTATGTTTTACGACTATCTTTGTTCTAGCTCTTGTTATAGTGTTAAGTTAGCTACATTTACTGCTTTGTCATTTTGAGGATCTAAGC TTTCATTTAAAATTTCAAGGTCAAAAGTTTGATAGTCATTTCAGAGTAGTGGATTTGGATCCTCTTATGTTACATAACCATTAGAAGGAGCTATGGAGAA CAAAGCACTATCTCCTACCATGTCAGTCATGTAACATGAGAAAATCAAACTTTGAAAATCAGCAGTTTACTATGGAAATGACATGTTGCCTTTTCTCTAA TATATACAATCTGTGATACTGAAGGGTGATATTTTGGAAGACCCAGCTAATGAGCCTAAAAAGGATATGTACATGATATCCGTAGACCCAGAGGATGCTC CAAATCAAGCAGAATATGTGGAAATTGGGATAGAATCAGGGCTTCCTGTTTCAGTTGATGGGAAGAGACGTTCGCCAGCATCTTTACTTGCCGAGCTCAA TGAAGTTGGTGGAAGGCATGGAATTGGCCGAATTGACATGGTTGAGAGTAGGCTTGTAGGTATGAAGAGTCGTGGAGTTTATGAAACTCCTGGTGGGACC ACCCTATTTACTGCAGTGTGCGAGTTGGAATCTTTGACACTTGATCGAGAAGTGATTCAAGTCAAAGATTCATTAGCCCTTAAATATGCAGAGTTGGTTT ATGCTGACAAATGGTTTGATCCACTCCGTGAATCCGGGGATGCGTTTATGCAGAAGATCACAGAGACCACCACTGGTTCTGTGACTTTGAAGTTGTACAA AGATTTTGTTACTGTAACTGGTCGGAAGAGCCCCTTTAGCCTGTATAGACAAGTCATTTCATCATTTGAGAGTGGACAGATATATGACCAAGATGATGCT GCTTAGTTTATCCGGCTTTATGGTCTTCCGATGAGGGTCTGAGCAATGCTTGAGCAGGGTATCTAAGCGTTGATTTCATTTAAACATATACTTGATTGAT AAAAAGGGATTGCTTTGATGCACTTGATTCAGTGACATTGACTTGTTTTATAAAAGGAATTGATGAATTAAAAGCGGTGAAGTAATTTTAAAAAATATGT TGTCAAGTTATGCCAAGAATTTAATTAATGTATTGTATTTTCAATACCAAATATTGTGCAAAGAATTTAATCAATGTATTGTACTTTGAATACCAAATAT TATG
• Tissue: pods
• Gene name: LI_gene_183366;
• Additional information: details;

Expression of Ll_transcript_517407

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 1
• PS3: 0.8
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517407

• Blastp: Argininosuccinate synthase, chloroplastic from Arabidopsis with 85.58% of identity
• Blastx: Argininosuccinate synthase, chloroplastic from Arabidopsis with 85.58% of identity
• Eggnog: Citrulline--aspartate ligase(COG0137)
• Kegg: Link to kegg annotations (AT4G24830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463586.1)
• Pfam: Arginosuccinate synthase (PF00764.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;