| Id Trinity | TRINITY_DN51235_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_517409 |
| Sequence | CTACAACCCTAGAGTAACAGTTGCAGACCCACAAGGCCACAATACAAGACAATATAAATGGACAACTGATTAAATTACAACACTACCCTGGGAAACCCTT AAAAACACAGATCCGAGTAGATCATAACACTGAACCTCATCACTTGTACCTTGTTGCTGCAACGAAAAACAATGGCACAGTTGAAAGCACTTCCTTCATC GTATTCATACCCTGCCACTTTTCCTTCCGTACACAGAAAAGAGCAGCTTCTGCATCAGCAGTTCTGGAAGGCAAATCCATCATCATTCAAAGAGTTGGCG ACAAGAACAACTGTTGAAACCAGCAAACATCAAGTTATAAAAGCAGTGGTACGCAGTGATGCAGAAGTAGAAATCTCTGAATCCAAGAAGGGTGGTGGGC TACGTGGAAAGTTAAATAAGGTTGTCTTGGCTTACAGTGGTGGCTTAGACACATCAGTCATTGTCCCATGGCTGAGAGAGAATTATGGCTGTGACGTTGT TTGCTTCACAGCTGATGTTGGCCAAGGTATAAAAGAACTGGATGGTTTAGAAGCCAAAGCCAAAGCTAGTGGGGCCTCTCAGTTAGTGGTAAAGAACTTG AGGGAGGAATTTGTTCGCGATTATATATTCCCTTGTCTGCGTGCTGGTGCAGTTTATGAAAGGAAGTATTTGCTTGGCACTTCAATGGCCCGGCCTGTTA TTGCAAAGGCCATGGTTGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTCTCCCATGGGTGTACAGGGAAAGGAAATGATCAGGTTCGATTTGAGCTCAC TTTCTTTGCACTAAACCCCAAGCTTAATGTCGTGGCTCCATGGAGAGAGTGGGATATTACTGGGAGAGAAGATGCTATTGAGTATGCTAAAAAGCATAAT GTACCTGTTCCTGTAACAAAGAAATCCATATATAGCAGAGACAGGAACCTCTGGCACCTTAGTCATGAGGTATGTTTTACGACTATCTTTGTTCTAGCTC TTGTTATAGTGTTAAGTTAGCTACATTTACTGCTTTGTCATTTTGAGGATCTAAGCTTTCATTTAAAATTTCAAGGTCAAAAGTTTGATAGTCATTTCAG AGTAGTGGATTTGGATCCTCTTATGTTACATAACCATTAGAAGGAGCTATGGAGAACAAAGCACTATCTCCTACCATGTCAGTCATGTAACATGAGAAAA TCAAACTTTGAAAATCAGCAGTTTACTATGGAAATGACATGTTGCCTTTTCTCTAATATATACAATCTGTGATACTGAAGGGTGATATTTTGGAAGACCC AGCTAATGAGCCTAAAAAGGATATGTACATGATATCCGTAGACCCAGAGGATGCTCCAAATCAAGCAGAATATGTGGAAATTGGGATAGAATCAGGGCTT CCTGTTTCAGTTGATGGGAAGAGACGTTCGCCAGCATCTTTACTTGCCGAGCTCAATGAAGTTGGTGGAAGGCATGGAATTGGCCGAATTGACATGGTTG AGAATAGGCTTGTAGGTATGAAGAGCCGTGGAGTTTATGAAACTCCTGGTGGGACCATCCTATTTACTGCAGTGCGCGAGTTGGAATCTTTAACACTTGA TCGAGAAACAATTCAAGTCAAAGATTCATTAGCCCTCAAGTATGCGGAGTTGGTGTATGCTGGCAGATGGTTTGATCCACTTCGTGAATCCATGGATGCG TTTATGCAGAAGATCACAGAGACCACCACTGGTTCTGTGACTTTGAAGTTGTACAAAGGTTCTGTCACTGTAACTGGTCGGAAGAGCCCCTTCAGCCTGT ATAGGCAAGACATTTCATCATTTGAGAGTGGGCAGATATATGATCAAGCGGATGCTGCTGGGTTTATCCGGCTTTATGGTCTTCCGATGAGGGTCTGAGC AATGCTTGAGCAGGGTATCTAAGTGTTGATTTCATTTTTAACATGTACTTGATTGACAAAAAGGGTCTGCTTTGATGATGCACTTGATTCAGTGACATTG ACTTGTTTTACAAAACGAATTGATGCAATAAAAGCAGTGAAATAGTTTTAAAAAACATGCTACAAAGTTATGGCAATAATTTAATTAATGTATTGTATTT TCAATACCAAATATCATTCGAAGAATTTAATCAATGTATTATATTTTCAATACCAAATACTACAGGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_183366; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517409
| Blastp | Argininosuccinate synthase, chloroplastic from Arabidopsis with 82.81% of identity |
|---|---|
| Blastx | Argininosuccinate synthase, chloroplastic from Arabidopsis with 84.43% of identity |
| Eggnog | Citrulline--aspartate ligase(COG0137) |
| Kegg | Link to kegg annotations (AT4G24830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463071.1) |
| Pfam | Arginosuccinate synthase (PF00764.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |