Ll_transcript_517411

• Id Trinity: TRINITY_DN51235_c0_g1_i9
• Name Transcript: Ll_transcript_517411
• Sequence: CTACAACCCTAGAGTAACAGTTGCAGACCCACAAGGCCACAATACAAGACAATATAAATGGACAACTGATTAAATTACAACACTACCCTGGGAAACCCTT AAAAACACAGATCCGAGTAGATCATAACACTGAACCTCATCACTTGTACCTTGTTGCTGCAACGAAAAACAATGGCACAGTTGAAAGCACTTCCTTCATC GTATTCATACCCTGCCACTTTTCCTTCCGTACACAGAAAAGAGCAGCTTCTGCATCAGCAGTTCTGGAAGGCAAATCCATCATCATTCAAAGAGTTGGCG ACAAGAACAACTGTTGAAACCAGCAAACATCAAGTTATAAAAGCAGTGGTACGCAGTGATGCAGAAGTAGAAATCTCTGAATCCAAGAAGGGTGGTGGGC TACGTGGAAAGTTAAATAAGGTTGTCTTGGCTTACAGTGGTGGCTTAGACACATCAGTCATTGTCCCATGGCTGAGGGAGAATTATGGTTGTGATGTCGT TTGCTTCACAGCTGATGTTGGCCAAGGTATAAAAGAACTGGACGGTTTAGAAGCCAAAGCCAAAGCTAGTGGGGCCTCTCAGTTAGTGGTAAAGGACTTG AGGGAGGAATTTGTTAAAGATTATATATTCCCTTGCCTGCGTGCTGGTGCAGTTTATGAGAGGAAGTATTTGCTCGGCACTTCAATGGCTCGCCCTGTTA TTGCAAAGGCCATGGTTGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTCTCCCATGGGTGTACAGGGAAAGGAAATGATCAGGTTCGCTTTGAGCTCAC TTTCTTTGCTCTAAACCCCAAGCTAAATGTTGTGGCCCCATGGAGAGAGTGGGATATTACAGGGCGAGAAGATGCTATTGAGTATGCTAAAAAGCATAAC GTACCTGTTCCTGTAACAAAGAAATCCATATATAGCAGGGATAGGAACCTCTGGCACCTTAGTCATGAGGGTGACATTCTGGAAGACCCAGCTAATGAGC CTAAAAAGGATATGTTCATGATGTCTGTAGACCCAGAGGATGCTCCAAATCAAGCAGAATATGTGGAAATTGGGATAGAGGCGGGACTTCCAGTTTCAGT GAACGGGAAGAGGCTTTCACCAGCGTCTTTACTTGCTGAGCTCAATGAAGTTGGTGGAAGGCATGGAATTGGCCGAATTGACATGGTTGAGAATAGGCTT GTAGGTATGAAGAGCCGTGGAGTTTATGAAACTCCTGGTGGAACCATCCTATTTGCTGCAGTGCGTGAGTTGGAGTCTTTGACACTGGATCGAGAAACGA TTCAAGTCAAAGATTCATTAGCCCTCAAGTATGCAGAGTTAGTGTATGCTGGCAGATGGTTCGATCCACTTCGTGAGTCCATGGATGCCTTTATGCAGAA GATCACAGAAACAACAACTGGTTCCGTGACTTTGAAATTGTACAAAGGTTCAGTTACCGTAACTGGTCGTACCAGCCCCTTTAGCCTGTATAGGCAAGAC ATCTCATCATTTGAGAGTGGACAAATATATGATCAAGCTGATGCTGCTGGGTTTATCCGGCTTTATGGTCTTCCGATGAGGGTCCGAGCAATGCTTGAGC AGGGCATCTAGGTTATTTCGTTGACAAAGGGGGCTACTTTATTTAGTCGATAGAGTAGATTTGATGACATTCACTTATTTTAGGAAAGGAAATGATGCAA TAAAACTTTTGAACTATTTTTAAAAGATGAGCTGATATTTTATTCCAATAATTTGTGTTTCCAGTACTAAATATTATAATATTGTGCTTTCAGTATCAAG TCAAAGACAAAGGAATTCAATTCCAGTTGGTATTTTGTCTTGCAGTTTCCATGCACGCTTTCTGTTTTGCTCATGATCCCAAGTATTGGGGTGCTCCCCT TGTGGTCTTAATTTGGGTTTAGTAGGCAACCTTGTATCAAAAAAAAAAAAAAAAAGGTAACAGTG
• Tissue: pods
• Gene name: LI_gene_183366;
• Additional information: details;

Expression of Ll_transcript_517411

FPKM

• PAB: 4.8
• PNAB: 38
• PS1: 34.4
• PS2: 31.2
• PS3: 27.9
• PW1: 15.5
• PW2: 14.4
• PW3: 12.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517411

• Blastp: Argininosuccinate synthase, chloroplastic from Arabidopsis with 84.95% of identity
• Blastx: Argininosuccinate synthase, chloroplastic from Arabidopsis with 83.1% of identity
• Eggnog: Citrulline--aspartate ligase(COG0137)
• Kegg: Link to kegg annotations (AT4G24830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463071.1)
• Pfam: Arginosuccinate synthase (PF00764.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;