Ll_transcript_517289

• Id Trinity: TRINITY_DN51240_c2_g1_i13
• Name Transcript: Ll_transcript_517289
• Sequence: AGGGAAAAATCACTTCGGACAGCATCTTAATGTCGAGGGAAACCCAAATGGATTCGGAGAATTACATGCATACCTAGAGTCTTGGATACCATCCTCTATG GACAGCTTTGAGTCTTGCATTTCAGTTTGTGATTTCGGATATGGTCATAGCTTGCCCTTGTGCTCTAGGCCTAGCAACTCCTACAGCTGTCATGGTTGGT ACTGGAGTTGGTGCAACTCAAGGCGTGTTGATTCCAGGAGGAAAGGCTTTAGGAAGTGCACATAGGGTGAATTGCATTGTATTTGATGAACCCTGACAGT TGGTATTGGAGTTGGTACAACTCAAGGCGTGTTGATCCCAGGAGGAAAGGCTTTAGGAAGTGCACATAGGGT
• Tissue: pods
• Gene name: LI_gene_183393;
• Additional information: -

Expression of Ll_transcript_517289

FPKM

• PAB: 5.8
• PNAB: 3
• PS1: 4.4
• PS2: 3.2
• PS3: 2.6
• PW1: 5.1
• PW2: 4
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517289

• Blastp: -
• Blastx: Probable copper-transporting ATPase HMA5 from Arabidopsis with 80.33% of identity
• Eggnog: p-type ATPase(COG2217)
• Kegg: Link to kegg annotations (AT1G63440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420907.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;