| Id Trinity | TRINITY_DN51240_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_517280 |
| Sequence | TGCACCTCGATGCCGGAGTAGTCCCAAAAGGATTTGGAGGCCCTTGCGTGCTTCCATCAACAACACCGTTGGAGCCACTAGTCTTGTTACTCTTGAAAGA CTCAACTTATTTCTTTAGGGTCCCATGTTTCCCTTATTCTCTCATGAGCCACATTTCTTTTCCCATTGGATTATATATATAAAACCAGCAATTATTGGGC TTTTTGTGCAGGTCATTTTGCTTTCTCTTTCAACTTGGCTTTCATGGTTTTTAGCAGGAGAATTACATGCATACCCAAAATCTTGGATACCATCCTCTAT GAATAGCTTTGAGCTTGCACTTCAGTTTGGGATTTCAGTTATGGTCATAGCTTGCCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTCATGGTTGCT ACTGGAGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGAGAAAAAGCATTAGAAAGTGCACATAAGATAAGTGAATTGCATTGTATTTGATAAGACAGGA ACTCTGACAGTTGGGAAGCCAGTGGTTGTTACTACAAAACTCTTCAAAAATATGTCACTTCAAGATTTCTACCAATTTGTTGCTTATATGTTTTTGGGTG GCACCGTTATGAGTAAATTACATACCTGCATTATTGTTGCATACTAATTGTTCAATGTTCTTTTTAGTGTATGCTCTATTAAACTTTTTGTATCATTTTC TTTATTTGAACCATTTTTGTATTGAGGTGGTTTTGTGTTTGCTTCTTCTTCGCTCCTTGTCACTGTTCCACTTAGTACCTTTCCCCAGCCTTGTTTTCCT CCAGTTGTCTGCATAAACCTTCAAGTTTTTTGTTGTTGAACATTTTATAAAAGGTCATAGGAGTAGAAGCAAACTTGATTTTCAAACTGAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183393; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517280
| Blastp | Probable copper-transporting ATPase HMA5 from Arabidopsis with 83.91% of identity |
|---|---|
| Blastx | Copper-transporting ATPase HMA4 from Oryza sativa with 76.39% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT1G63440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014506120.1) |
| Pfam | E1-E2 ATPase (PF00122.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |