Ll_transcript_518422

• Id Trinity: TRINITY_DN51243_c0_g2_i5
• Name Transcript: Ll_transcript_518422
• Sequence: ATTACAGACCACGCATAATGCAGCCACAACATTGCGGTTGTGGTGACTGCCACAGCCGCATCACATCATAATTGCGATGTGACACTGAATCACAACGATG ATCGCAACCGCATATTTAATCACAGAGTGATTCACATTGCAACTGTCGTAATTCGCATCGCAATCACAGTAACGCCGTGACGGAAATTGTGACAGAAACT TAAAACAAAGGGACACATTAATGTTGCATGCATATATTGAGATATGAATTTGTTAAACCATTGGTTTCATTTAGTTGTTTATGTTACTGATTCAACAGAA AAGCAAGCTTGAAGGACAAGATTTTGGTAAACCAGATAACTCAGAGGAATTGGAAAACACTAAGAAACTCATAGAAGAACTCAAAGTTAAACTAGTCAAG ATTGAAAGAGAAGAGGGTGAGGCAAAAGAAGAGGTTGAACTTGTGAGTCTCAAAATTGAAGATATGGAGCAGGATATTATCAATGAAGCTAGTATTGAAG CCAAGGCACGATTTGAGGTCGAGAAAGCAAGGCATGACGCCGCGGTTTCGGATTTGGAATTCGTTAAAAAGGAACTAGACTCATTGTATAAGAAATATGA TTCTGTGGTGAGTGGAAGGGATATAGCTGTGAAAAAGGCAGAAGATGTTGTTGCTGCATCCAAGGAGGTTGAAAAGGAACTGGAAGATTTGACTGCTGAG TTTAATGCAACAAAGGAGTCGTTGTACGCGGCGCGAGCGGCGCACTTGGATGCGGAAGAACAAAGATTCGGAGTCGTGGATGAAGAAACTCACAACTTGA AGGTAGAATTTGAACAAGCAGAAGAAGAATTTGAGAGGCTTAACCAGCAAGTTTCCTCTGCAAGGGTTCTGAAATCTAAGTTGAATGTGTCTTCCTCTTT ACTGCATGATTTGAAAGCTGAATTAGCTGCATATATGGATTCGAAAATAAAGGAGGAAGGTGACGATGAACGAAAAAAGGAACTCGAGGAAGTGAAAATG AACATAGAGAAAGTGACTGCCGAGGTTAACAGGTTCAGGGAGGCTTTGGCGTCGCTAAAATCAAAACTAGAACTAGAGAAGTCAGTGCTCACCAACCTCA AGCAAAGTGAGGAAAAAGCTTCGGCTGCGGTTGTGACTCTTGAAGAAGAACTAGAGAAGACTAAATTTGCAATAGCTTTCCTCAAGATGAAAGAGGAAGA AGCAAGAGATATGATGATTGAGTTGCCGAAGAAGCTTCAGCAGGCGGCACGAGATGCTGATGAGGCCAAATCACTTGCTCGGGCTGCGCAGCGAGAGCTT GTTGAAGCACAAGAAGAGGCTGAGCAAGCCAAGGCCAGAGCAAGTACATTGGAGAGAAGATTACTAGCAACAAAGATGGAGATAGAAGCTGCCAGGGCTT CTGAAAAGTTGGCGAAAGAATCGACAAAGGCATTGGAGAAGAGCGAATCAACTGTAAGCAACGATGACACAGCCTCTTCCGATATGGTGACAATCACATT GGACGAATATCACGAGCTCGGTAAGAGAAGCTATAAGATGGAGGAGCAAGCTAATGCAAGGGTTGCAGCTTCTAATTCTCTAATTGAGATGGCTAAGGAG TCCGAGTTAAGAAGCTTAGAGAAGTTGGAGGTACTCAATGAAGAATTGGCTGTGAGAAGAGAGTCTTCGAACATTGCGACCGAGAACGCTGAGAAAGCGA GACAAGAGAAGCTCGCTTTAGAAGACGAGTTAAGAACATTGATAGAAGAACAAGAGCAACAAAGGAATGACTCGACAAATGCAGCAGCGGCAGCGGCAAC AGCAACTGAGCCTGCACATGATTTATTAAGCTCAAAGGGTAAAGCTCCTTTGAATAACACCGAAAGCGGATCAGCCCCGGATACAAAGAGCAAGAAGAAG AAGAAAAAGAAGTCATTGTTTCCTTCAAAGGTTGTTATGTTCTTTGCCAAGAGAAAAACACACCCAGCCAAGTGAATGTAACCCTTGAAGTACTATTTTT TCTGAAAGGATTCTCCTTTGGATTCAAATTGTGAATTTGTATTAAACTATTTGATTCTGTGAATAAAAATACAATCATTTATTGTATATAAGGATACAAT GTTATATACACAATAACATTATTTTCC
• Tissue: pods
• Gene name: LI_gene_183410;
• Additional information: details;

Expression of Ll_transcript_518422

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_518422

• Blastp: Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 from Arabidopsis with 49.48% of identity
• Blastx: Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 from Arabidopsis with 49.54% of identity
• Eggnog: Pfam:DUF827(ENOG410YG1U)
• Kegg: Link to kegg annotations (AT2G26570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446981.1)
• Pfam: Weak chloroplast movement under blue light (PF05701.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;