Ll_transcript_518201

• Id Trinity: TRINITY_DN51255_c1_g1_i5
• Name Transcript: Ll_transcript_518201
• Sequence: GAGAAAGGGCATGAATCTTTCCCTTTTTAGCTCTGACTGTATTTGTGACCAATACTTGCAAATTGCAGTGTGCAATCCTATAACCAACCAAACTCAAAAA ACATAACAAACCGCTACAAATTAATTTAAATAAAAACACTCTTCCACGCTCAAATTCTAGAGAGATATAATAAGAAAGAAAAGAAAAATTCCACAGTTAC CTTCTTCTCTAATTTCTAGGTACAGAAAGAGAACAGTGAAGAAGAAAAAAGAATAGTAGAAACTCCAAAAATCAATGGCGAATTTTAGGGTTTTGTAACC AAAACAGTATCAAGATTCCAATGGAAATGCCTGGTAGAAGATCCAACTATTCTCTTTTAAGTCAAATTCCCGATGACCAGTTCAGCGCTGGCGCCGCCTC TTCCGGGAATACTGCACCGTCATTTTCCGGCGACGGAAAAACCAACCGATCCAAGTTCGATTGGGACGTAGTCTCTGATCACAGAGTAGCTCAGCAGCAA GCGAACAATCGGATCGGAAGTTTGTTCAACGCGGCCGGATTACAGAGGCAATCAAGTGGAAGCAGTTTTGGCGAAAGCTCGATTTCAGGCGGTGCGGACT ATAACGCTCCGGCGCTGTTCGCAGCGGCGGTTAGCGATGTGGATACATTTGGTGGTGAGGTGAGGAATAGGTTATTGGAGACTCCGGCCCTTGTTGCAGG GTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTAGCCCTGGCGCTTCGGCTTTCGTTAGATGCGACTTGTGCTGATGAC CCCAATTTTCTTGATTCAGGTCTGGATGAATCCGCCTTGAGGTCTTCGAGTTCGGCGGAGATGGTGTCGCATAGATTCTGGGTGCATGGCTGTCTATCAT ACTCCGACAAAATTCCCGATGGCTTTTACCTAATTCATGGGATAGATTCCTTTGTTTGGACAGTGTGCACTGATTTGCAGGAAAATGGCCGAATTCCAAC TATTGATAAACTAAAGTCTGTGGATCCCTGCATCAATTCTTCACTTGAAGTAGTTTTGGTGGACAGACGCAGTGACCCCAGCTTAAGAGAACTTCAAAAC AGAGTACATAACACTTCTAGTAGCAGCATAACAACAACAGAGGTTGTAGATCAGCTGTCCAAGCTTGTTTGCAACCATATGGGGGGTTCAGCTTCTATTG GGGAAGATGACTTTGTTTCCAGCTGGAGAGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCCATAGGTAGTCTGTCTGTTGGCCT CTGCAGGCATCGTGCTATTTTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGTTGTAAATATTGCAAAAGGGATGATGCT GCATCTTGTCTTGTCCGGTTTGGGCATGTCAATGACAGGGAATATCTTGTTGATTTACTTGAGAAGCCAGGTTACTTATGTGAGCCCGATTCATTGCTCA ATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGAGTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTT CTCGGACTGTTTGTGTCTTGAGCTTGTCTTTGATAACAGTTCTGCAGGGGCTGTTACTGATGGAGATTCTGGTTTCCCCATTCCGGATCAGTTTGATGGG AAGTACAAGGACAGGACTAATGCCAGGCAATTAACAAATGACAGCAACAGAAGTTCTTACCTGCCTCTACATCAAAAAGTTTCTCATTCAAACACACATG ATCATGATTCTGAGACAACTGTTGCTAAGGATCCACCACTTATAAAGCATAAGCGTCCTCCCGCTGGTATAAGAACCCCATTAGCACTAACAAATCCCAA TAATGACATTATCGAGGAAAGGTTATTTTTTGAAGGAGGTCAACTTAATCCTGTCAAACCTAATCGGGAGATTGCCCTTGACATGGAGGATTTGGATATA TCATGGAGTGATCTTGCTTTAAAAGAAAGAATAGGATCAGGTTCTTTCGGAATAGTACATCGTGCTGAGTGGAATGACTCGGAGGTTGCGGTTAAAATTT TGATGGAACAAGATTTTCATGCTGAACGCGTCAATGAATTCCTTAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATAGTTTTATTGATGGG GGCAGTCACTCAGCCTCCGAACTTATCAATTGTCACAGAATATTTATCAAGGGGTAGTTTATACAGGCTGTTGCATAGACCTGGTGCAAAAGAGGCATTG GATGAGAGGCGTAGGCTTTCTATGGCTTATGATGTGGCAAAAGGGATGAATTACCTTCATAAACGTAATCCACCCATTGTTCATAGAGATTTGAAATCTC CAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGTCTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGG GACTCCTGAGTGGATGGCTCCGGAAGTTCTCCGTGATGAGCCATCAAATGAGAAGTCGGATATTTACAGCTTTGGTGTAATCTTGTGGGAGCTTGCGACA TTGCAACAGCCATGGAGCAATTTGAATCCAGCACAGGTTGTAGCAGCTGTTGGGTTCAAGGGAAAAAGGCCGGAGATACCCCATGACTTGAATCCTCAAT TAGCCTCAATAATCGAGTCTTGCTGGACCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCCTTGAGAGTATTGCTCAAACCCCCTAC ACCTCAACCCGGTTGTCCAAACATGCCATTACTTGCCTGAACAGTTGGAATAAAGCTTTTATTCATGCACATACTTCCGGATTTTAGTCCCAGGTGATTA CCAAATCCAAAATGACATCTTATAGCACTAAATCTCTGGCTTGGACATAGTATATCCTTTATTTTTGTTGTGTTAAACTACCAATTTTCTAGTGGAAACA TGTTCTTCCGTTTTTTGTTATTATTAACTATTATTCTGTCGAAAATAAGTAATACTATGCCGAGGCATTGTTGCAACTCGATCACAAATCCGTTGAGGGA CTTTTGTGTGCGCGCACATGTATGAGACGGTGTTTGGTTTAGGTGGTTGGTGTTGACAATGTTCACATTTCCCCAATGGTTGTTGCTTGTATAAAGTTAG CACATCAATTGATACACATGTTTTTTTTGGTTGCAGAGGCACTGTTTGTATATATTTCTGTTCTTATTCCAGTTGAGAATACTTATTTTCCAAGCAAAGC AAGGATACTCCATCTTCATTCCAACAAAATTGTTTGATTAGGTGAT
• Tissue: pods
• Gene name: LI_gene_183514;
• Additional information: details;

Expression of Ll_transcript_518201

FPKM

• PAB: 1.9
• PNAB: 2.9
• PS1: 3.2
• PS2: 1.4
• PS3: 2.5
• PW1: 2.5
• PW2: 3
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_518201

• Blastp: Serine/threonine-protein kinase CTR1 from Arabidopsis with 62.05% of identity
• Blastx: Serine/threonine-protein kinase CTR1 from Arabidopsis with 62.05% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT5G03730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442966.1)
• Pfam: Ethylene-responsive protein kinase Le-CTR1 (PF14381.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;