Ll_transcript_518193

Id TrinityTRINITY_DN51259_c3_g3_i7
Name TranscriptLl_transcript_518193
SequenceCTCCGTACAAAAGTTCCAAACCCCACTCACTTCATCACTTACCTGACTCGATCGACTTCACAATTCAAATTTCAAAACACAAACTCGAACGCTTCCGAGT TGACTCAATGGAACCGAAACCCGAGTCATCACCTACCGAGTCCGACTCATCTCGAGGACGATCCACCACTCGCCCTAGGCTCTTCATCAAGGAAATGGTG ATGCGCAATTTCAAATCCTACGCTGGCGAACAACGCGTTGGTCCATTCCACAAGAGTTTTTCGGCTGTGGTTGGACCTAACGGGGGTGGAAAGAGTAATG TGATTGATGCGATGTTGTTTGTGTTCGGGAAGAGAGCGAAGCAGATGAGGCTGAATAAAGTTTCTGAGCTTATTCACAATTCCACCAATCATCAGAATTT GGACAGTGCTGGTGTTTCCGTTCATTTCCAGGAGATTGTTGATTTGGAAGATGGAACATATGAGGCTGTTCCAGGGAGTGATTTTGTGATTACCAGGGTG GCTTTCCGGGATAACTCATCTAAGTATTACATTAATGATCGTTCGAGTAACTTTACTGAAGTTACCAAGAAACTGAAAGGGAAAGGTGTTGACCTTGATA ATAACAGGTTTCTGATCCTTCAGGGTGAAGTTGAGCAGATTTCACTCATGAAGCCAAAATCTCAAGGACCTCATGATGAAGGTTTTTTAGAATATCTGGA GGACATCATCGGTACTGACAAATATGTTGAAACAATTGATGAATCAAATAAGCAGTTAGAATCCCTGAATGAGAGAAGATCTGGGGTTGTGCAAATGGTT AAGCTATCTGAGAAAGAAAGGGACAACTTGGAGGATGTAAAGAATGAAGCAGAAGCATTCATGTTGAAAGAGTTATCTCTTTTAAAATGGCAAGAGAAAG CTACAAAGTTGGCTGTTGATGATACAGATGGAAAAATGGTTGAGTTACAAGAGAATGTTTCTACCCTAGAAGAAAATCTGAAGGCTGAAAGGGATAAAAT TAAAGAAAGTAAACAAACTCTGAAGGAGCTTGAAACTAAGCACAACAACTACATGAAAAGACAAGAGGAGCTAGATAATGACATGAGGAAGTGTAAGGAA GAGTTCAAGGAGTTTGAGAGGCAGGATGTCAAGCATCAGGAAGATTATAAACATTTGACTCAGAAGATCAAGAAGCTGGAGGACAAAGTTGAAAAGGATT CAAAAAAACTTGAAGCCCTTGTAAAGGAGGGTGAGGACTCAACTGATCTAATACCGAAACTTGAGGATGATATCCCAAAACTGCAGAAATTATTGATCGA AGAGGAGAGGTTGTTAGAAGAAATCATTGAGACGTCCAAAGTCGAAACTGAAAAATACCGCTCTGAGCTTTCTAGAGTCCGTGCTGAGCTTGAACCTTGG GAAAAACAATTGATCGAGCACAAGGGAAAACTTGATGTTTCATCTAATGAGAATAAGCTTCTAAATGAAAAGCATGAAGCTGCTTGTGAAGCTTTTAAAG ATGCTCAAAAGCAGATGAAAAGCATATCAGAAACAATCAAATCAAAAACCGCCAGCATTTCTCAAATTAAGAGTGACATTGAAAAGAGCAAGTCCGAAGC ATCAAAAGCTCACCAAGTGGAAAAAGACTGTATCATAGAACAAGATGAACTCATTCCTCTTGAACAAGGTGCTAGACAGAAGGTTGCAGAGCTGAAATCT GTTCTAGATTCTGAGAAGAGTCATGGATCAGTTCTAAAAGCGATCTTGAAAGCTAAGGAAACCAAACAGATAGAAGGAATATATGGCCGTATGGGTGATT TAGGTGCTATTGATGCAAAGTACGATGTTGCGATTTCAACAGCATGTTCTGGACTTGATTATATTGTGGTTGAAACAACAAATGCAGCACAAGCCTGCGT TGAGCTACTTCGTAGAGAGAATCTTGGTGTTGCTACTTTCATGATATTGGAGAAGCAAGTTGATCTTCTTCCAATGTTGAAAAAAAAAGTAAGCCCTCCA GAGGGGGTTCCACGTCTTTTTGATTTAGTTAAAGTTCAAGATGAAAGAATGAAGCTTGCTTTCTTTGCTGCACTTAGAAACACAGTTGTCGCTAAGGATC TTGACCAGGCCACACGCATAGCATATGGTGGAAATAATGAATTTCGGCGTGTTGTTACTCTTGATGGTGCACTCTTTGAAAAATCTGGAACAATGAGTGG TGGGGGCGGTAAGCCCCGTGGTGGGAAGATGGGGACATCTATTCGAGCTGCTAGTGTGTCCATGGAAGCTGTTGCAAATGCTGAGAAGGAATTGTCTGAA TTGACTGATAAATTGAATAACATTCGCCGTACAATTGTGGATGCTGTAAAACAATACCAGGCCTCTGAAAAAGTTGTTGCTGCTTTGGAAATGGAGTTAG CTAAAAGCCAGAAGGAGGTTGAGAGTTTGAATTCACAACATAGTTATATTGAAAAACAACTCAATTCCCTTGAGGCTGCATCAAAGCCACAGGAGGATGA GCTTGATAGATTGAAAGAGCTGAAGAAGATTATTTCTACTGAAGAAAGGGAGATTAATAGACTTACTCAAGGGTCTAAACAACTGAAGGAAAAGGCTTTG GAGCTTCAGAAAAATATAGAAAATTCTGGGGGTGAAAAATTAAAATCTCAGAAGTCAAAGGTCAAGAAAATTCAGTCTGATATTGATAAGAATAATTCAG AGATTAATCGACACAAGGTACAAATAGAGACGGGACAAAAGATGATGAAAAAGTTGACTAAGGGAATTGAAGAGTCAAAGAAGGAGAAAGAACGCCTTGC TGAGGAGAAGGAAAATATGAAAACCATCTTCAAAGAAATAGAACAGAAAGCATTTGTAGTTCAGGAGAATTATAATAAAACACAAGAGCTGATTGACAAA CATTGTGTTGTCTTGGGGGAAGCAAAATCTGAGTATGATAAGATGAAAAAAGTAGTGGATGAATTGCGTGCATCTGAGGTTGATGTTGACTTCAAATTAA AAGACATGAAAAGAGCATTGAAAGAATTGGAGATGAGGGGGAAAGGTTACAAAAAAAGACTTGAAGAGTTGCATACTGCCATTAGCAAGCATCTTGAACA AATTCAAGTAGATTTAGTGGATCATGAAAAGCTGCAGGCTACGTTGTCTGATGAACTTCTTAATGGGGCTTGTGACCTGAAAAGGGCTCTTGAAATGGTC ACATTGCTCGAAGCAGAGCTGAAGGAAATGAATCCAAATCTTGATTCGATTGCAGAATATCGAAAAAAGGTATCATTGTACAATGAGCGAGTAGAAGAAC TTAATACAGTAACTCAGGAGCGGGATGATATAAAGAAGCATTATGATGAATTGAGAATGAAGAGATTGGATGAGTTTATGGAAGGATTTAATGCTATATC TTTAAAGTTAAAAGAAATGTACCAGGTTTGGAATTTGCTCCCTCTCTGACTCCCCTTACTTTCCCAGACACAGACACATGCATATTTGCTCCTGTCTTCA CTATTGTTTACTGAACTTTTTAATTTGTTATAATAATAGGTTCTATCACCTTCCTTATACCCTTTGAACCTTCGTGCAAGAATGACTTTGATGCCAATAA AATTGTGTTTGTATTGCTGAATATAGATTGGCACAGAACTAAATTTCTCCATCTTTTCATGTGTGAATCTGATGATGCAAATATATATTTAAATATTTCT GCGCATAAATTAGTGTAGGATCAAGATATGAATATTGGGAGG BLAST
Tissuepods
Gene nameLI_gene_183548; 
Additional informationdetails; 

Expression of Ll_transcript_518193

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_518193
BlastpStructural maintenance of chromosomes protein 4 from Arabidopsis with 73.19% of identity
BlastxStructural maintenance of chromosomes protein 4 from Arabidopsis with 72.94% of identity
EggnogRequired for chromosome condensation and partitioning (By similarity)(COG1196)
KeggLink to kegg annotations (AT5G48600)
CantataDBLink to cantataDB annotations (CNT0001234)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432441.1)
PfamRecF/RecN/SMC N terminal domain (PF02463.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;