Ll_transcript_517512

• Id Trinity: TRINITY_DN51260_c1_g1_i1
• Name Transcript: Ll_transcript_517512
• Sequence: CCCAAAAAACTTGCTCAGTATATATAATAATGATTTGTTGCCCCAAAAAATTGCTAGCATAAAATATTTTCTTAAAGTATCTTTATTCTCAAAACAAATC CCCATCCATCAATCTCCCACGTTAACCCACTTTCCTAATCCACCGTACACGTCACCACTGAAGCCAATATCGCATCCGCGCGTGCATCGATCTCACAATA GGCGCGTGTAGATCATCTTTCAACTACTCCAACACAAACTAGAATATTTGAAGATATATCTGTATTTATATAAAATGAGATTTTCTTCATACTGGTTAAT TGCGCCTTAGGTCACGACTTCGCTTCCTCTCCCTGTCATTATTAGGGCTTAATTCTCCTCGGATCGGTGTAGTTCCGCCGTGCCGGAGCCAATTACGACG CTGTCCGTGACGGCAATCGAAGTTTCCTTACCGGTGTAAACATGAAGGTTTTTGTCAAGACTTTGAAAGGCACTCACTTCGAAATTGAAGTCAAGCCCGA AGACACGGTTTCTGAAGTGAAGAAAAATATAGAAACTGTTCAGGGTGCAGATGTCTATCCTGCTGCGCAGCAAATGCTTATTCATCAAGGGAAAGTACTT AAGGATGCTACAACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTAATAATGCTATCAAAGAGTAAGAGTACATCCGGTGAAGGATCTGCTA CTTCAACTGCCCCTTCAGTGAAGACGTCACAGATAAGTGCAGCTCCTACTTCAACCCTCCCAGTGTCAGTGTCAGTAGCACCTGCTGCAACTATACCACC ACCTGTTACTGCTCCTGCTCCTGCTCCTTCAACTGCTCCTGCTTCTATACCTACGAGCACTGCTGTGGAAGGGTCTGATATCTATGGGCACGCATCATCA AATCTGGTTGCTGGAAACAACTTGGAGGAAATTATTCAGCATATCCTTGATATGGGTGGTGGGAGCTGGGATAGGGATACTGTTGTCCGTGCTCTTCGAG CTGCTTTCAACAACCCTGAGAGAGCTGTTGAATATCTATATTCAGGTATTCCTGAGCAAGCTGAAGTACCCGTTGTGGGAGTGCCTCCAAGTGCACAACC TGCTAATCCTACAGCTCCTGCTCAACAAGCAGCACAACCATCTCCTGCTTCCTTAGGTGGACCTAACGCACTACCTTTAGACCTCTTTCCCCAGGGTCTC CCCAATGCTGGTGCTGCTGGTGCTGGCTCTTTAGATTTTCTACGCAACAGTCAACAATTCCAAGCCTTGCGGGCTATGGTGCAGGCTAATCCACAAATAT TGCAGCCTATGCTACAAGAGCTTGGCAAACAAAATCCCCAACTTATGAGATTGATTCGAGATCATCAAGCTGACTTTCTTCGCCTGATAAATGAACCTAT GGAAGGTGGCGAAGGGGATTTATTGGGGCAGCTGGCTGCTGGCGCGCCACAAACAGTAACTGTCACCCCTGAAGAACGCGAGGCAATTGAACGTGTAAGT TTTTACCTCTTGTCTATATAAGGCATTAAGTGTAGATGCTGTGTTCTTGTCCCATACTGTTAGATGAAAACATCATAAAATCTTGTTGAAATAAAGTCAG TGATAAGCTATAACGATAGTTTGAAAAAAAAAAATTCACAACAATTGCATCGGAAACTAACATAGGTAGGTCTAGTGGACCATCTGAATTTTTCTTTCTG AATTTGTTGAAGTTAACTGCATGACTCTATAATTATACATTTGTCTTCCAGACCTTATATTACTAATCAAATTTATCTCCATTTATCATCCTCAGAAACA AGATAGTTATTAGTTAACAAGCAAGTCATAGTATTATTAATAACTCCTTTGGTATTCAAATTTTCCGTGAGTTGTGATGTTTGTTTCCCACTGCAGCTTG AAGCAATGGGTTTCGATCGTGCAACAGTGTTAGAGGTTTACTTTGCTTGTAACAAAAATGAGGAATTGGCTGCCAACTACCTTTTAGATCACATGCATGA GTTTGATGAACAATAGATCTCCTTTCCAATTGTCAAATTATTTCTTGCGAATCTTTTCTTTTGATGGGTCTTGGTTATATACTTATTTTAATGAAAGTAA TGTTGGATATTGACAAGTCTCAAGTCTCAAATGGATGTTTTTACCTCCTCAGCGTTATTTATTGCCTTAGTGTTCAACGTTTCCACCTTCTCAACTCTTC ATATCCATAGTCGTTTGCATGCTATTGGTGGTTTATTCTCTGCATCCTTTTAAAATATAACGGCAAGTGTAGTGACTGTAGCCTAATCAAAGAAGTATCC TATCTGTCACGTGAAATATTGTTTTTACTTTTGCTTTCAATA
• Tissue: pods
• Gene name: LI_gene_183551;
• Additional information: details;

Expression of Ll_transcript_517512

FPKM

• PAB: 3.7
• PNAB: 2.3
• PS1: 2.5
• PS2: 3.7
• PS3: 5.2
• PW1: 1.1
• PW2: 1.7
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517512

• Blastp: Ubiquitin receptor RAD23c from Arabidopsis with 65.13% of identity
• Blastx: Ubiquitin receptor RAD23d from Arabidopsis with 61.22% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT3G02540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452405.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;