| Id Trinity | TRINITY_DN51260_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_517532 |
| Sequence | AAACAGTTCCTTCAGGTCCATTGCATTCACAACAATCTAGCTAACTCCGTTATTTTATCTCAAAACAAAACCCCATCCTCTTGTGTTTCCGTGAACCCCA CTTCCCTAATCCACCGAACACGTCCCCATCAACCCCATATTAAAGCAGCGCGTGCTATCAATCCCAGAAAAGCGCGTACAGGGTCACTCTTGTTTCTCTT CCATTCTCTCCGGATCGGTGAAGTTCCGCCGTGCCGGCGCCAATTGAGACGCTGTTCGTGGCGGCGATTGAAGTTTCAGTACTGCTGATAAACATGAAGG TTTTTGTCAAGACTTTGAAAGGCACTCACTTCGAAATTGAAGTCAAGCCCGAAGACACGGTTTCTGAAGTGAAGAAAAATATAGAAAATGTCCAGGGTGC AGATGTCTATCCTGCTGCGCAGCAAATGCTTATTCATCAAGGGAAAGTTCTCAAGGATGCTACAACCTTGGAGGAAAATAAAGTAGCTGAAAACAGTTTC ATTGTAATTATGCTATCAAAGAGTAAGACATCATCTGGTGGAGGATCTGCTACTTCAACTACACCCTCAGTCAAGACCCCACAAACAAGTGCTGCTCCTA CTCCACTCTCCCCAGTGTCAGTAGCACCTCAAGCTCCTGCTGCAACTGTAGCACCTCAAGCCCCTGCTGCAACTGTAGCACCTCTAGCCCCTGCTGCAAC TGTAGCACAACCTGCACCTGCTCCTTCTCCTGCTCCTGCTTCTATACCTTCGAGCACTGCTGTGGAAGGGTCTGATGTCTATGGACAGGCAGCGTCAAAT CTGGTTGCTGGAACCAACTTGGAGGAAATTATTCAAGAAATACTTGCTATGGGTGGTGGGAGCTGGACTAGGGATACTGTTGTCCGTGCTCTTCGAGCTG CTTTCAACAACCCTGAGAGAGCTGTTGAATATCTATATTCAGGTATTCCTGAGCAAGCTGAAGTACCCGTTGTGGGAGTGCCTCCAAGTGCACAACCTGC TAATCCTACAGCTCCTGCTCAACAAGCAGCACAACCATCTCCTGCTTCCTTAGGTGGACCTAACGCACTACCTTTAGACCTCTTTCCCCAGGGTCTCCCC AATGCTGGTGCTGCTGGTGCTGGCTCTTTAGATTTTCTACGCAACAGTCAACAATTCCAAGCCTTGCGGGCTATGGTGCAGGCTAATCCACAAATATTGC AGCCTATGCTACAAGAGCTTGGCAAACAAAATCCCCAACTTATGAGATTGATTCGAGATCATCAAGCTGACTTTCTTCGCCTGATAAATGAACCTATGGA AGGTGGCGAAGGGGATTTATTGGGGCAGCTGGCTGCTGGCGCGCCACAAACAGTAACTGTCACCCCTGAAGAACGCGAGGCAATTGAACGTGTAAGTTTT TACCTCTTGTCTATATAAGGCATTAAGTGTAGATGCTGTGTTCTTGTCCCATACTGTTAGATGAAAACATCATAAAATCTTGTTGAAATAAAGTCAGTGA TAAGCTATAACGATAGTTTGAAAAAAAAAAATTCACAACAATTGCATCGGAAACTAACATAGGTAGGTCTAGTGGACCATCTGAATTTTTCTTTCTGAAT TTGTTGAAGTTAACTGCATGACTCTATAATTATACATTTGTCTTCCAGACCTTATATTACTAATCAAATTTATCTCCATTTATCATCCTCAGAAACAAGA TAGTTATTAGTTAACAAGCAAGTCATAGTATTATTAATAACTCCTTTGGTATTCAAATTTTCCGTGAGTTGTGATGTTTGTTTCCCACTGCAGCTTGAAG CAATGGGTTTCGATCGTGCAACAGTGTTAGAGGTTTACTTTGCTTGTAACAAAAATGAGGAATTGGCTGCCAACTACCTTTTAGATCACATGCATGAGTT TGATGAACAATAGATCTCCTTTCCAATTGTCAAATTATTTCTTGCGAATCTTTTCTTTTGATGGGTCTTGGTTATATACTTATTTTAATGAAAGTAATGT TGGATATTGACAAGTCTCAAGTCTCAAATGGATGTTTTTACCTCCTCAGCGTTATTTATTGCCTTAGTGTTCAACGTTTCCACCTTCTCAACTCTTCATA TCCATAGTCGTTTGCATGCTATTGGTGGTTTATTCTCTGCATCCTTTTAAAATATAACGGCAAGTGTAGTGACTGTAGCCTAATCAAAGAAGTATCCTAT CTGTCACGTGAAATATTGTTTTTACTTTTGCTTTCAATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183551; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517532
| Blastp | Ubiquitin receptor RAD23c from Arabidopsis with 67.1% of identity |
|---|---|
| Blastx | Ubiquitin receptor RAD23c from Arabidopsis with 74.53% of identity |
| Eggnog | ubiquitin(COG5272) |
| Kegg | Link to kegg annotations (AT3G02540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452405.1) |
| Pfam | Ubiquitin-2 like Rad60 SUMO-like (PF11976.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |