Ll_transcript_517541

• Id Trinity: TRINITY_DN51260_c1_g1_i17
• Name Transcript: Ll_transcript_517541
• Sequence: CCCAAAAAACTTGCTCAGTATATATAATAATGATTTGTTGCCCCAAAAAATTGCTAGCATAAAATATTTTCTTAAAGTATCTTTATTCTCAAAACAAATC CCCATCCATCAATCTCCCACGTTAACCCACTTTCCTAATCCACCGTACACGTCACCACTGAAGCCAATATCGCATCCGCGCGTGCATCGATCTCACAATA GGCGCGTGTAGATCATCTTTCAACTACTCCAACACAAACTAGAATATTTGAAGATATATCTGTATTTATATAAAATGAGATTTTCTTCATACTGGTTAAT TGCGCCTTAGGTCACGACTTCGCTTCCTCTCCCTGTCATTATTAGGGCTTAATTCTCCTCGGATCGGTGTAGTTCCGCCGTGCCGGAGCCAATTACGACG CTGTCCGTGACGGCAATCGAAGTTTCCTTACCGGTGTAAACATGAAGGTTTTTGTCAAGACTTTGAAAGGCACTCACTTCGAAATTGAAGTCAAGCCCGA AGACACGGTTTCTGAAGTGAAGAAAAATATAGAAACTGTTCAGGGTGCAGATGTCTATCCTGCTGCGCAGCAAATGCTTATTCATCAAGGGAAAGTTCTA AAGGATGCTACAACTTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTAATTATGCTATCAAAGAGTAGGAGTACATCTGGTGAAGGATCTGCTA CTTCAACTGCACCTTCCGTGAAGGCTTCACAAACAAGTGCAGCTCCTACTTCAACTCCCCCAGTGTCTGTAGCACCTCAGGCTCCTGCTGCTACTGTAGC ACCTCAGGCTCCTGCTGCAACTGTAGCACCACCTGCACCTGTAACTGCTCCTGTTCTTGCTCCTATACCTGCAAGCACTGCTGTGGAAGGGTCTGATGCC TATGGGCAGGCAGCATCAAATCTGGTTGCTGGAACCAATTTAGAGGAAATTATTCAGCAAATCCTTGATATGGGTGGTGGGAGCTGGGATAGGGATACTG TTGTCCGCGCTCTTCGAGCTGCTTACAACAACCCAGAGAGAGCTGTTGACTATCTGTATTCAGGTATCCCTGAGCAAGCTGAAGCACCCGTTATAGGCCG AGTGCCTGCAAGTGCAGAACCTGCTATTCCTACAGATCCTGCTCCACAAACTGAACAACCAGCTCCTGTTACCTCAGGCGGGCCTAATGCTCTACCTTTA GACCTCTTTCCCCAGGGCCTCCCAAATGCTGTTTCTGGTGCTGCTGGTGCTGCTGGTGCTGGCTCTTTGGATTTTCTACGCAACAGTCAACAATTCCAAG CCCTGCGAGCTATGGTGCAGGCTAATCCACAAATATTGCAGCCCATGCTACAAGAGCTTGGCAAACAAAATCCTCATCTTATGAGATTGATTCGTGATCA TCAAGCTGACTTCCTCCGTCTGATAAACGAACCCGTGGAAGGTGGCGAAGGGAATTTGTTGGGGCAACTGGCTTCTGGCATGCCACAAGCAGTAACTGTC ACCCCTGAGGAGCGCGAGGCAATCGAACGTCTTGAAGCAATGGGTTTTGATCGGGCAACTGTGTTGGAGGTTTACTTCGCTTGTAACAAAAATGAAGAAT TGGCTGCCAACTACCTTTTAGATCACATGCATGAGTTTGATGAACAATAAATCTCCGTTTCAATTGTCAAATCATTTGTTGGTATC
• Tissue: pods
• Gene name: LI_gene_183551;
• Additional information: details;

Expression of Ll_transcript_517541

FPKM

• PAB: 10.6
• PNAB: 3.1
• PS1: 6.1
• PS2: 8.1
• PS3: 10.5
• PW1: 5.1
• PW2: 11.7
• PW3: 11.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517541

• Blastp: Ubiquitin receptor RAD23c from Arabidopsis with 68.53% of identity
• Blastx: Ubiquitin receptor RAD23d from Arabidopsis with 65.17% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT3G02540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441387.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;