Ll_transcript_517543

• Id Trinity: TRINITY_DN51260_c1_g1_i19
• Name Transcript: Ll_transcript_517543
• Sequence: TAAACATGAAGGTTTTTGTCAAGACTTTGAAAGGCACTCACTTCGAAATTGAAGTCAAGCCCGAAGACACGGTTTGCTCCTCTTTCTTGAGCGAGTTTCA TTCCCAATTTTCGTCTTTAGTTTTCTCGTGTTGTTAATTGCGTTCAGTGAATGGATTTAGCGAGAAGTTTCGGTTCACAACGTGCGTTATATAGCCCTGA ATTTGAGTGCTAATTAGGGTTTTTATTATTCTTTTTAAAATGTACATGTTAATTTTAATAATTGAGCATATCTGATTTTTATGTACTGCTACAACTGTTA TTGGGATCAATATGCAAGTGATCACAGGACTGTAAGAATTATCACCGCTAATAATTTTGGGGTCACACTTTATCTTAGTAATGTGCCTCTTTGGCGATTG CAAATTTCTAACAGTAGAACTTATCTAAATATTATATACTCTATAGTTCCCAAATGAGGAATTCTACTTATATGGATCTGTCAATGTTTCATCTTTTAAT CATATGGGTTTTGCGTTTATATGAATGTAATTATCTGCTTCTACCTTATTCTGTTTTTATTGAAATATGGTAATTCGTTTGATATATTAGCTGTAATGGT TGGTATTCTTCTCAGGTTTCTGAAGTGAAGAAAAATATAGAAACTGTTCAGGGTGCAGATGTCTATCCTGCTGCGCAGCAAATGCTTATTCATCAAGGGA AAGTACTTAAGGATGCTACAACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTAATAATGCTATCAAAGAGTAAGAGTACATCCGGTGAAGG ATCTGCTACTTCAACTGCCCCTTCAGTGAAGACGTCACAGATAAGTGCAGCTCCTACTTCAACCCTCCCAGTGTCAGTGTCAGTAGCACCTGCTGCAACT ATACCACCACCTGTTACTGCTCCTGCTCCTGCTCCTTCAACTGCTCCTGCTTCTATACCTACGAGCACTGCTGTGGAAGGGTCTGATATCTATGGGCACG CATCATCAAATCTGGTTGCTGGAAACAACTTGGAGGAAATTATTCAGCATATCCTTGATATGGGTGGTGGGAGCTGGGATAGGGATACTGTTGTCCGTGC TCTTCGAGCTGCTTTCAACAACCCTGAGAGAGCTGTTGAATATCTATATTCAGGTATTCCTGAGCAAGCTGAAGTACCCGTTGTGGGAGTGCCTCCAAGT GCACAACCTGCTAATCCTACAGCTCCTGCTCAACAAGCAGCACAACCATCTCCTGCTTCCTTAGGTGGACCTAACGCACTACCTTTAGACCTCTTTCCCC AGGGTCTCCCCAATGCTGGTGCTGCTGGTGCTGGCTCTTTAGATTTTCTACGCAACAGTCAACAATTCCAAGCCTTGCGGGCTATGGTGCAGGCTAATCC ACAAATATTGCAGCCTATGCTACAAGAGCTTGGCAAACAAAATCCCCAACTTATGAGATTGATTCGAGATCATCAAGCTGACTTTCTTCGCCTGATAAAT GAACCTATGGAAGGTGGCGAAGGGGATTTATTGGGGCAGCTGGCTGCTGGCGCGCCACAAACAGTAACTGTCACCCCTGAAGAACGCGAGGCAATTGAAC GTCTTGAAGCAATGGGTTTCGATCGTGCAACAGTGTTAGAGGTTTACTTTGCTTGTAACAAAAATGAGGAATTGGCTGCCAACTACCTTTTAGATCACAT GCATGAGTTTGATGAACAATAGATCTCCTTTCCAATTGTCAAATTATTTCTTGCGAATCTTTTCTTTTGATGGGTCTTGGTTATATACTTATTTTAATGA AAGTAATGTTGGATATTGACAAGTCTCAAGTCTCAAATGGATGTTTTTACCTCCTCAGCGTTATTTATTGCCTTAGTGTTCAACGTTTCCACCTTCTCAA CTCTTCATATCCATAGTCGTTTGCATGCTATTGGTGGTTTATTCTCTGCATCCTTTTAAAATATAACGGCAAGTGTAGTGACTGTAGCCTAATCAAAGAA GTATCCTATCTGTCACGTGAAATATTGTTTTTACTTTTGCTTTCAATA
• Tissue: pods
• Gene name: LI_gene_183551;
• Additional information: details;

Expression of Ll_transcript_517543

FPKM

• PAB: 28.1
• PNAB: 20.7
• PS1: 22.5
• PS2: 22.2
• PS3: 26.7
• PW1: 16.6
• PW2: 17.5
• PW3: 15.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517543

• Blastp: Ubiquitin receptor RAD23c from Arabidopsis with 65.27% of identity
• Blastx: Ubiquitin receptor RAD23d from Arabidopsis with 62.89% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT3G02540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452405.1)
• Pfam: Ubiquitin family (PF00240.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;