Ll_transcript_517515

• Id Trinity: TRINITY_DN51260_c1_g1_i3
• Name Transcript: Ll_transcript_517515
• Sequence: CCCAAAAAACTTGCTCAGTATATATAATAATGATTTGTTGCCCCAAAAAATTGCTAGCATAAAATATTTTCTTAAAGTATCTTTATTCTCAAAACAAATC CCCATCCATCAATCTCCCACGTTAACCCACTTTCCTAATCCACCGTACACGTCACCACTGAAGCCAATATCGCATCCGCGCGTGCATCGATCTCACAATA GGCGCGTGTAGATCATCTTTCAACTACTCCAACACAAACTAGAATATTTGAAGATATATCTGTATTTATATAAAATGAGATTTTCTTCATACTGGTTAAT TGCGCCTTAGGTCACGACTTCGCTTCCTCTCCCTGTCATTATTAGGGCTTAATTCTCCTCGGATCGGTGTAGTTCCGCCGTGCCGGAGCCAATTACGACG CTGTCCGTGACGGCAATCGAAGTTTCCTTACCGGTGTAAACATGAAGGTTTTTGTCAAGACTTTGAAAGGCACTCACTTCGAAATTGAAGTCAAGCCCGA AGACACGGTTTCTGAAGTGAAGAAAAATATAGAAACTGTTCAGGGTGCAGATGTCTATCCTGCTGCGCAGCAAATGCTTATTCATCAAGGGAAAGTACTT AAGGATGCTACAACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATTGTAATAATGCTATCAAAGAGTAAGAGTACATCCGGTGAAGGATCTGCTA CTTCAACTGCCCCTTCAGTGAAGACGTCACAGATAAGTGCAGCTCCTACTTCAACCCTCCCAGTGTCAGTGTCAGTAGCACCTGCTGCAACTATACCACC ACCTGTTACTGCTCCTGCTCCTGCTCCTTCAACTGCTCCTGCTTCTATACCTACGAGCACTGCTGTGGAAGGGTCTGATATCTATGGGCACGCATCATCA AATCTGGTTGCTGGAAACAACTTGGAGGAAATTATTCAGCATATCCTTGATATGGGTGGTGGGAGCTGGGATAGGGATACTGTTGTCCGTGCTCTTCGAG CTGCTTTCAACAACCCTGAGAGAGCTGTTGAATATCTATATTCAGGTATTCCTGAGCAAGCTGAAGTACCCGTTGTGGGAGTGCCTCCAAGTGCACAACC TGCTAATCCTACAGCTCCTGCTCAACAAGCAGCACAACCATCTCCTGCTTCCTTAGGTGGACCTAACGCACTACCTTTAGACCTCTTTCCCCAGGGTCTC CCCAATGCTGGTGCTGCTGGTGCTGGCTCTTTAGATTTTCTACGCAACAGTCAACAATTCCAAGCCTTGCGGGCTATGGTGCAGGCTAATCCACAAATAT TGCAGCCTATGCTACAAGAGCTTGGCAAACAAAATCCCCAACTTATGAGATTGATTCGAGATCATCAAGCTGACTTTCTTCGCCTGATAAATGAACCTAT GGAAGGTGGCGAAGGGGATTTATTGGGGCAGCTGGCTGCTGGCGCGCCACAAACAGTAACTGTCACCCCTGAAGAACGCGAGGCAATTGAACGTGGACAC TTCTCTAAAGGATGTAGCTTCAACAGCTTATGCACAATCTTGTGCACCATATCACACATGGGCAGTTCGAACAGCTGTATATGCCGGGATGTATACACTT CCAACGAGATACCAACTCTTGGCGAAGCTCAATGAAACTGATCAATCAGCTCAGAAAAAGATGAAAAGGTACATTGATGCCTCACTTCCAGTAATTGAAT ACATTGATGAACTGTACCTTTCTAGAAATATTGTACTGGACTGGTGATTTATTATATTTTTTATAAAGAAAAATGAGTCAAAGAAGAAATAATACGAAGA AACTGAGTCTGTTTGTTCGAAGGCAGTGATGTGGCTCAACTGTTAGTATATACATGCTTTCCAATTTTTGTTGTACTTTGTTAGATGTAATTATGTTAGT TTCTTAATGGTTGTTGGCCCCTACGGAGATTAATGATTTTTTATATTATATTAAAATGGGGAA
• Tissue: pods
• Gene name: LI_gene_183551;
• Additional information: details;

Expression of Ll_transcript_517515

FPKM

• PAB: 7.5
• PNAB: 8.7
• PS1: 10.9
• PS2: 6.3
• PS3: 8.5
• PW1: 9.3
• PW2: 5.7
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517515

• Blastp: Ubiquitin receptor RAD23c from Arabidopsis with 65.3% of identity
• Blastx: Ubiquitin receptor RAD23d from Arabidopsis with 60.83% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT3G02540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452405.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;