Ll_transcript_517522

• Id Trinity: TRINITY_DN51260_c1_g1_i5
• Name Transcript: Ll_transcript_517522
• Sequence: TATCAAAGCTCAATTAGAGCGCGTGGATATCAAACCAATATACATATCAAACGAGATTTTGAGTCTGGTCGTTCATATAAAGACGAGATTTTGCTCAGCC TCTACACTCTCGTGTAGTTGTTCTCAAATACAGTATAAACCCTCGCCGGCGAGATTCCGGAGACTATTCCGTCGACTATCGATTACCGGTGGAAGTGACG AAGATGAAGGTTTTTGTGAAGACTCTCAAAGGAACGCACTTCGAAATTGAAGTGAACCCCTCAGACACGGTTTCTGAAGTGAAGAAAAATATAGAAGCTG TTCAGGGTGCAGATGTCTATCCTGCTGCACAGCAAATGCTTATTCATCAAGGAAAAGTTCTCAAGGATGATACTACCGTGGAGGAAAATAAAGTAGCTGA AAATAGTTTTATTGTAATCATGCTATCGAAGAGTAAGAGCCCATCTGGTGAAGGATCTACTGCAACTGCACCTTCAGCTAAGGCTCCACAGACAAGTGCA GTTCTTACTCCAACCTCAGTGTCAACAGCACCTCAAGCTCATGCTGTGACTGGGACAACACCTCTAGCTGTTACTGCCCCAACACCTGCTCCTGCTTTGG TACCAGCTCCTGCTTCGGCACCAGTTCCTGCACCTACATTGTCCAGCACTGCTGTGCCTGGGTCTGATGTATATGGGCAGGCAGCATCCAATCTCGTTGC TGGAAGCAACTTGGAGGAAACAATTCAGCTAATTATTGATATGGGTGGAGGGAGCTGGGATAGGGATACTATTGTCCGTGCTCTTCGTGCTGCTTACAAC AACCCTGAGAGGGCTGTTGAATATTTGTATTCTGGCATACCAGAGCAAGCTGAAGCTCCACCTGTGGCCCGAGTGCCTGGAAGTGTACAACCTGGAAACT CTCCAGCTGCTGCTCCACAAGCAGCGTCTGTTACTTCTAGTGGACCTAATGCTAATCCTTTGGACCTCTTTCCCCAGGGCCTTCCTAATGTTGGTGCTGG TGGTGCTGGTGCTGGTGGTGCTGGCTCTTTAGATTTTCTGCGCAACAGTCAACAGTTCCAAGCCTTGCGAGCTATGGTGCAGGCTAATCCACAAATATTG CAGCCTATGCTACAAGAGCTGGGCAAACAAAACCCTCATCTTATGAGATTGATTCAAGAGCATCAAGCTGACTTCCTTCGCCTGATAAATGAACCTGGGG AAGGTGGCGGTGACGGCGGTGAGGGGAATATATTGGGACAGCTGGCAGGTGCCATGCCACAATCAGTGACTGTTACCCCAGAAGAGCAGCAAGCAATTGA ACGTGTACGTTTATCCTCTTGTCAATATAAAGCATTGAATGATTATTGTTATTTTCCTGTTTAAATCTAAGAACGGAAACATTCATTTTAAACTATCTAG CTGCCCTTCCTTCATTGGAACTTTTAGTATTAACAAATGGATAGCTGGTGTGTCTTTTTTCGCCATTATTTCATGGGATGTGATATGAAATTATGATTGA TGACCTAGTCTGTTAGATAGTTTTCCTAAACAAACTAATATAGGTGTTCTCATCTGAACTTCTTTTAAACCAAGTTGGAGTCACTAGGAGGGTTGTATTA AGTTTGTGATCCTAAAAGTTGTACAATTAGCATTTCACATTTTTTAAACAGCTTTAAACATAATTATACAATTTGGTTTGCCGATAGTTCCTAACAAACA TATGAAAATGAACACAAACACAGTCTTCCAAATTTTAGTCTGTCTCTTTCTAAGAGTGTGTTTGTGTTCATTTTTGGAGGGAAAGGGATAAGGAGAAGGT TTAGTTATACTATATCAATGATTTGAAGAAATTTTACAAGGGGGAGGTTTGCTCCTACCCTCATTTTTCTCCAAAACTGAACTTACAAGCACACCCTAAG TGGATGAGCTTTAATAAAAATCATGTTAGCCCACTTGTGGTTTTACATGTTTCTCTGTAATTTATATCTTGTATGGGTAATGATCTTTGTTTTTTTTGCT CCAGCTTGAAGCAATGGGTTTCGACCGTGCAATTGTATTGGAGGTGTTTTTCGCTTGTAACAAAAATGAGGAACTTGCAGCCAACTACCTTTTAGATCAC ATTCATGAGTTTGATGAATAATCAGTTCTCCTTTGCAATCTGTTAAATGATACCTTGTTTATTTTCCTTTTTATGGATCTTCGTTATATGTACTGAGGTA ATGTTTGATAATGACAATTCTGGATTTGGTCAAAAATATTTAAGTATTTAACCTCCTCTGCATTATTGTCC
• Tissue: pods
• Gene name: LI_gene_183551;
• Additional information: details;

Expression of Ll_transcript_517522

FPKM

• PAB: 0.5
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.5
• PS3: 0.2
• PW1: 0.5
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517522

• Blastp: Ubiquitin receptor RAD23c from Arabidopsis with 62.47% of identity
• Blastx: Ubiquitin receptor RAD23c from Arabidopsis with 60.4% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT3G02540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456603.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;