Ll_transcript_517235

• Id Trinity: TRINITY_DN51266_c1_g1_i12
• Name Transcript: Ll_transcript_517235
• Sequence: AAACGGCTTCGTTTACCAAACACCGTTCTTCTTCTTACTCTACTTGCCCTATTCATTTTTCCTTTGACGTTGATAAAGACTCAACTACAAACTCAGTGTA AATTTCTCAGTCACAAATAATTCTAACTCTCTTTGTCTCTATATCTCTCCATATATTTTTCTTCTTTCATTTTTTATCTTTACCTTATCTAATTTCAGCT TTCAGTTTGCCTTTGTGGTGCCGAATCATTCTTCACCCTGCTCTTCGACAAGTTCAGGCTTGTTTGGTTACTGACTGAAATATTGTGGTATAGATATTTG TCCAGCACTGAAATTGTATCATTAACCTTGTCCAGCACTGAAATTCCAATATCCTCATATTTTTGCTTCAAATAGTTCCAGATGTCAGAAACTGACATGG CAGTTATCGAACCTGAGATGATGAAGCCCTATATCTGGCTTCAGATTTCTGATGGCTCGGTCCAACAAGTCGAACAAGAAATTGCAATGTTTTGCCCTCT AATATCTCAAGAAATAATACAAAAAGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAATCCTGCAATGTTGAGCTTAGTTCTT GATTATTGTCGATTCCATCAAGTACCAGGCCGCTCCAACAAGGAACGAAAGTCTTATGATGAAAAATTCATTAAGATGGATACAAACAGGCTATGTGAAT TGACGTCTGCAGCGGATAGCTTAAAGTTGAAGCCGTTGGTCGATCTTACTAGTCGTGCACTTGCTCGAATAATCGAAGGAAAATCACCAGAGGAGATACG TGATATATTTCACATTCCTGATGATCTTACAGAGGTCTCTATTGCTTGAAGAAAAGTTGGAGCCCTTGAGAAACATAACTGATGACCCAAGGATTAGACT TTTGAATCGTTTGTATGCCAAAAAGAGGAAAGAATTAAAAGAACGTGAAAAGTTGAAGAATGCCGAAGCTGAAAGAGAGCGTATAGATGAACGTTCAGTT GATGACCTTTTGTCTTTTATTAATGGAAATGAATCAGATAGAAAGGCGAATAAAACTTCCAAAAATAAAAAGAAGAACCGGAGGAAAAAAGAGCAACTGA AGAACTCTTCTCCGAAAGAACCATCTGAACTGAATAAGGAGGTTGTTGAGGTAAATGGCCGTAATACCAGACAAGAAAGTTCTGAAGCAGTTAGAATTGG CCAGACATCAAATTTAGACTATACAGAAGATGGCACTTTTTTTGATATTGTTGATTTTGATGATGAAGATATGGATGATGAGATTGATCCTGCATTGAAG GAAAAAATAGACAGGGAGGTGGAAGATTTTGCTCGTCGATTGAATTCTAACTGGCCAGAGAGGATGCAAGACTTTTTATCACCAGGGCGAGAAAAGAAGA CATCACTTCTTACTTCCGACAGGACTAGCTTTCTAAGTCGACATGCGTGATTGGACTCAGATTGGAAATGAAACTTTAGAAACCTACCCAGATGGCAAAA TGGCTTGAACAGTTTTGAGAGATGCTAACAAGAACTAGAAAAGTGTTGCATGTCAGTTCTTTTCTTCTTTTTTTCATTTATCTTGTTTTATTTAATTCTT TGGAGTTTTTTATGGAGTTTGGTCAGGGCACTATTTTACTTTGGGTTTCTCTTGTACTTTTTTTGGGGTATATTTATCATTTTTGGGTACATCTTTTGTT GTACTTTTAGATAAATAATAAAATCTTGTATGAAATTCATTACTATGCATTTACATTACTCTGTATGGAATACAATTTTCACC
• Tissue: pods
• Gene name: LI_gene_183610;
• Additional information: details;

Expression of Ll_transcript_517235

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.7
• PS2: 0.6
• PS3: 0.2
• PW1: 0.6
• PW2: 0.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517235

• Blastp: SKP1-like protein 21 from Arabidopsis with 57.53% of identity
• Blastx: SKP1-like protein 21 from Arabidopsis with 82.78% of identity
• Eggnog: ubiquitin-dependent protein catabolic process(COG5201)
• Kegg: Link to kegg annotations (AT3G61415)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430054.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;