Id Trinity | TRINITY_DN51267_c0_g1_i2 |
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Name Transcript | Ll_transcript_517371 |
Sequence | TATTCTTACATCACACTCTTCCTTCTATTCTTCTTTATTTCTTTCACCCAAACACTCCCTTAATCCTCGCTTCACCCTTCTCCAAGCTTCCTAGAAAATG ACTTCAATTACTTCTGTTGAACTCAACTTTATGGTCTTTCGTTATCTTCATGAATCAGGCTTCACACATTCTGCTTTTATTTTTGGATACGAGGCTGGCA TTAACAAATCCCCCATTGATGGAAATTCGGTGCCGCCGAGCGCTCTTATTTCATTTGTTCAGAAGGGGTTACAGTACTTTGAAATGGAAGCTAACTATAG TAATAGTGATGAAGACCTGGAAGAAGACTTTTTGTTCTTAACACCTATGGATCTTATCACAAAAGATGTCAATCAACTTAGGCAAATGATAAATGAAAGA AGGAAAAAGCAACAGAAGGATAAAGACAAGGGACCTGAGAAGGATAAAAACCAGGGACCAGAGAAGGATAAAAACAAGGGACCTGAGAAGGATAAAAACA AGGGACCTGAAAAGGAGCATGGACGTGAATATGGACGAGTAAGAGAAAAGGGAAAACGCAAAAGGGGGAAAGAAGTTGGAAAGGATAGGAAAAATGTAGA TAACGATAAAGAGCAAGACCAGCTACATGGAGGTCAGAGTGGCGGAGAAATGGTTACTGGTCAAGATGATAAAGCAGTAAGGCTTGAAAAGTGTGGAGCA TTTGGAGGACCGGAACCAATGGACATCTCAACAACATTATTATCTCAGCCATGTGCAATTCCTAGTTCTGATGTGACAGTTTTGCAAGGGCACACTTCAG AGGTATGTGCTTGTGCATGGAGTCCAACAGGGTCTCTTCTTGCGTCAGGGTCTGGGGATTCAACAGCTCGTATTTGGGCAATAGCAGAAGGGCAATGTAA AACCGCTTCACAGAAGCCTTTGAATGCAGTGGTATTGAAGCACGTCAGGGGTAGAACAAATGAAAAGAATAAAGATGTCACTACACTTGATTGGAATGGG GAGGGGACACTTCTTGCAACTGGTTCTTATGATGGGCAAGCAAGAATTTGGACCACTAATGGTAGGGTGCTTTTCTCCGTGCATAGATTTCAAAAAATTT TATGTTGTGGTATAATAGGTCTCTAAGATGTTCATAAGTGTTGGTATGATATCTCTGTTCTCTATTATTTTGTTGGGTTGGGCGAGAATTTGTAGCTAAT TAGCTATCGTTGGAAGCATTGGGAAGGTCATGTGGCCTGAGGAGATAAACCCCGTCTTTTGCTTCTTTTTCAAGTGTGCATTTACTCCCACAATTACCAT AGAACTGCATCTAATTTATCTTTAGAGTAAACTTTCAGTGACCATTGATATAAAATTTGTTCCATCTTTTAGGCTATAGTGTCCATAAAAAGTGTGATTG TTTCAAACTAATGTCACAGCTGATCCAAGCATCTGACAACCCCTTGCTCCCCTTTTTCTTTGGATTAGGTGCTATGTAAAAGTTAAAGTAGGAAGGAGAT AAGTATTCATTTGCATTCAAATGTCTCTTCAATTTTAAGAGTATTGGAAGAACATTTAGATTTTTTTCATTTGCACTCTCATGTTGGTTAATATCTTCGT CTTCATTCTTGACTCATGTATATGTTATTATTTTTCATGGCACATTTTATTTGTCAGTTTTATATTTTTCTCTCCCGTCCTTGTTGATGTTTTGGATTTC TTATTGTCTAGTGGTTCTTGCACTGTATGGTTGATGGAGAAGTAACTGGGATGAGAAGGGCGTAGATATTCATCTTTGTATTTTTTGAGGTGAATGTAAA TGGTGGAAAGTCATTCCCCTGAATCCCCTTCAAATTGTATAAGGAGGCAGAGTGGAAATTTCATTTTATGATAAATAGGCAAAGAAATATTGATCCTTAC ATTTTGCATGAAAAAAAGTTTTTTTGGTAGAGGTAAGACCTACTTCAGTGATCTGTACACCTCACAAGAGATTAGTATTTGGTTGTCGGCTAGGGCCTAG GGGATAACCTTGGTACACCATATAAGATAGAGGCAATAACAAAAAAGGTAAATTTTTGGATTATTTATTATGTTGTTATACATTAATACCTTCCCTTCTC ATTCTCCTTTAAGCAACCAATTCGCATCATCAGTTTGTGATTGATATTGCTGTGTAGCCAGCTTGTTTAATTAGACTGGTAGAGAGCTCATGATGTATAT TTGAATCCGAAAGGTTGCAATGCATCTTTTATGCATGTGTTGATGTGGGATAAGAGCCATTAGTTTGCACCTGTTTAATAATATGAGCAATGATACTCTC AATCATTTTGTTTATAAATATCACTATTGTGTGTGATTGTTGACCCTGCAAAAAGTTAATCATATAATTGCTTGCTGACACAATTTTGATTTTCTGTAGC CAAAATGGTTGAGATCAGCATGACTTTACTAATAATTTTGTAATCAAAAAAATTATTTTACGAACTTTAAATTATTTGAGTGATAAAGATATTGCACTTT TGGCTTAACAGTTTGTAGTTTATGCTTGTCTGCATATGGACCCTTTTATTATGTGTGTATCTATCTGTCATGTGAGAGTAGCTTCAATGGATAATATATT AGTGTCTGGTATTTGCAGTTGCGCTCATTGTATTTGTGAGAATTGTAGGTTTCTTTGTGCATGCTTTTAGAATATTTGAATTTGATTTTAGCTTCAAACA AAATCTTTGTTTTGATTATGTGGTGACCAATCTTTGACCAGGTGAACTGAGTAGTACATTAAACAAACACAAGGGACCCATTTTTTCTCTAAAGTGGAAT AAGAAAGGCGATTATCTTCTTACTGGAAGTTTTGATAAAACTGCAATTGTGTGGGATGTGAAGACAGAGGAATGGAAACAGCAATTTGAATTTCATTCAG GTCCAACACTTGATGTTGACTGGCGCAACAATGTGTCCTTTGCCACAAGTTCCTCTGACCATATGATTTATGTTTGCAAGATTGGTGACAACCATCCTAT AAAAAGTTTTAGTGGACACCAGGGTGAAGTTAATTGTGTCAAATGGGATCCAACGGGTTCATTGCTGGCCTCCTGTTCTGATGATAACACTGCAAAGATA TGGAATATGAAGCATGATAAGTATCTTCATGATTTAAAGGAGCATTCCAAGGAGATATATATTATCAGATGGAGCCCCACTGGTCCTGGCACAAGTAACC CTAATAAAAAGTTAGTTTTAGCTAGTGCGTCATTTGACTCAACCGTGAAGTTATGGGATGCGGAACTCGGGAAATCTTTATACACCTTGAATGGACACAG GGAACCCGTATATTCTGTTGCATTCAGTCCAAATGGTGAATATATAGCCAGTGGGTCTCCCGACAAATCTGTGCTCATATGGTCATTGAAGGATGGCAAG ATCGTGAGAACATACACAGGCAACGGAGGCACTTTTGAGGTCTGCTGGAATAAGGAGGGTGACAAGCTCGCCGCTTGTTTTGCGGATAATACAGTTTGCC TTTTGGATTTCAGAATGTAAGATCCTGAAAGAGGCACCATTTCTTTCTGGCTAGTAAATTGAGTTCAGATTAGATGGGTGGAAGAATACTTTGGATGGAT AGGTTTTCTATTTTAAGCATATTTATTTAGGCATTATTTATTGCTCTTGAATTCAGTGGTAGTTTATTTCTATTAATTTATAGTATATAGTAATTTGTAG GTGTACATTCTTAATAAACAAGAATGTATAGATTTAGCTGAACAATATCATGTATAATTATGGCTTGACCTCCTTAGTATGCATGTAGTTGTCTTTTCTT TCCTTACATTGGATAAATTCTTAGGTGCTGTCTAAGTAAAAAAAACTACCTTATATATCATTTAATGGTTATTACTTTAGTAATGTGGGGGTCCTTGAAT AGGTAGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_183615; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517371
Blastp | WD40 repeat-containing protein HOS15 from Arabidopsis with 50.55% of identity |
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Blastx | WD40 repeat-containing protein HOS15 from Arabidopsis with 83.01% of identity |
Eggnog | f-box-like WD repeat-containing protein(ENOG410XRSY) |
Kegg | Link to kegg annotations (AT5G67320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458459.1) |
Pfam | LisH (PF08513.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |