| Id Trinity | TRINITY_DN51267_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_517391 |
| Sequence | TTGTTACATTTGTTCAGAAGGGGTTGCAGTACTTTGAGATGGAAGCTAACTTGGGTCATAATGATGCAGACCTTGAAGAAGATTTTTCATTCTTAAAACC TATGGATCTTATCACAAAAGATGTCAATGAACTTAGGCAAATGGTAAATGAACGAAGGAAAAAGCGTCAGAAGGATAAAAATAAGGGACTTGAAAAAGAG CATGGACGTGAACGTGGACGGGTAAGAGAAAAGGAAAAACGCGAAAGGGAGAAAGACACAGGAAAGGATAGGAAGAGCGTAGATAGTGATAAAGAGCAAG TCCAGCTGCATGGAGATCGAACTGGCAGAGAAATGGTGAATGATAAAGAAGACATGGTAGTAAAGCTTGAAAAGAGTGGAGCAGTTGGAGGACCGGAACC AATGGACATCTCTACAACATCATCCCAGCCATGTGAAATTCTCAGTTCAGACGTGTCAGTTTTGCAAGGGCACACTTCTGAGGTGTGTGCCTGTGCATGG AGTCCTACAGGATCTCTTCTTGCATCAGCGTACGTATCTCCACGAACTATTTATTTTTTCATTAAAATGTTTTAGCATGCATATATGTCTATGGTCAATG TACATATATTTCACAACTTGGATTTTTATTTGTTATACCTCCAAACTTGTTTACTTTCATTTTGGTGTAGGAAAGCCAAGTGTTCTGGTATCATTTTTTA TTTATTTTGGAAATATTAATTAAACATGTTTGAAAACATGTTTTTTTCTCTATTTAATTTCCAAAAAAACTGTAACTAAGGTTTTTTTTATTATAAAACA TAAAATTAAATCAATTTTGTGGAGCAACTGCTTTGACTGCGAGCTATGGGAATTATTATTCATAAATAGAAATTTAATAGATAATTGCTACTTAAAAATC GTTTTCCTCTATTGGTGGGTTTTGGAGAGATTTAAAAGTATCCAGTTACTCATATTTTAGCAATTTTCACTTGCGCCCAAACACCCATTCTTCACAGGTG TTGAAATAAATATTGACAAGGATCACTTTCTCCCATTTCGAATTTTCCTTAATTCCATACTTTGTCTCTTAAACTTCAAGCCATTTCTCGTAAAATATGT AGATATAAATGCAGGCTTGAATTTTCTGCCTCTCAAAGATAATGATATATGTAATCTATTTGTTGAGAAGTTGTTTAAACTGTTGCTCATATTGGAGTAT CAAGAGTATCATGCATCATGCAATTTATCCATTTGGTAAAACTAATGGAAATTTACCATAGGTTGAGGGAGTAGGTACACTTGTTTTCATCTGAATGGTT TGCTTTACAATGATTTTAAAGTTGTGCATTTATTTTTCCAAATAAATTTGTACTCTTTTAACAGTGTTCCAAAAATATCTTCTGTTCTGAATTCTCTGTT TCATAATATTTTTTGACTCTGGGTGTCTAAAAATGTTTAAGAGACAAATGAACTAGGACAGGATCAAAAGGCCTCAAATTTTATAAGTTTTGAAGTTGCA TTTTGATGTTAGAAGGCATGATAGCTAATCTCTAAGATAATCAATTCTGACCCTACATGGTGATTCTATAAGTTTTAAAGAAACTTGATGTTGGGAAATA TCTTTATTGCGACATTCTTTTCTTTTTATAAAATAAAAAGCAATGGTTATATAAGATGCTAATATTAGCTTTTTTCTTTTTGGGTTTTAAAAAATTTCTG AAGATAACTTATAATATTCTTGTGCTTTACTATTGTTATCACCACATCAAATCTAGGTCTGGGGATTCAACAGCTCGTATTTGGACAATAGCAGAAGGGA AATGTAAAACTGGTTCACAGAAGCCTTTGAACGTAGTGGTATTGAAGCATGTCATGGCTAGAACAAATGATAAGAATAAAGATGTCACTACACTTGATTG GAATGGAGATGGGACGCTTCTGGCAACTGGTTCTTATGATGGACAAGCAAGAATTTGGGCCACTAATGGTGAACTGAAGACTGCCTTAAACAAACACAAG GGACCCATATTCTCTCTGAAGTGGAACAAGAAAGGCGATTATCTTCTTACCGGAAGCTTTGATAAAACTGCAATTGTGTGGGATGTGAAGAAAGAAGAAT GGAAACAACAATTTGAATTTCATTCAGGTGCAACACTTGATGTTGACTGGCGCAACAATGTGTCCTTTGCCACAAGTTCCTCTGACCATATGATTTATGT TTGTAAGATTGGTGACAACCGTCCTATAAAAGCTTTTGCTGGACACCAGGTTTGTACCCTAGACCCTATTTTGTAGCATTGTGATATTACAGTAATACTT AAAACACTGAAATTATACCCATCGGGAGGAACAAATGTTCAGCCCGGCTTTCTTGATAATAAGTTAAAATGGGGTGAAGCCCAGCTGCCCAGGGCTGCTG GTTTAAGAATGAGCTTGACTTCCTGAGTTGATCTAATAGTTGGGTATATTTCTTATGACTATTAGGAATTGATTGGGTAGAAAACTCATGTAGCCAACTC CATCTATTGGGAAACCCTTTGTTTTTGTGTTGTCGTAATCTGCTTTGATAAAGTGAAGTCCCACTTAACTAGTTTAAAGGTTCTGTACGTATGAATTTTA TATCATAGTTGGCTGAGGTTGAAGGTTCAGATATCTGAAATTGTTGCTCATTGAGTGTATACAGGAAGCTATATGCTGAAATATTTCATTGAAATGCAAT GTAGTGATTGGAGAACTTTTTCTTCCTTCTAATGAGCTTACTGCAATTTCAGGGTGAAGTTAATTGTGTCAAATGGGATCCAACAGGTTCATTACTGGCC TCCTGTTCTGATGATCGGACTGCAAAGATATGGAATATGAAGTTCGATAGGTACATTTATGATTTAAAGGAGCATTCCAAGGAGATATATATTATCAGAT GGAGCCCCACTGGTCCTGGCACAAGTAACCCTAATAAAAAGTTAGTTTTAGCTAGGTAAGTTAATTCCTTGGTGAATCAGGTTTATTGTTCTTGATTTAT GTACATTTTTGTATTTATTTTTGTATTCTCGAAATTTAGAACTACTGTTTGTTGTTTACTAATTTACTCCATTGCTACGCACCTTAAACTTAGTCGATCG GCCACAACTGCATTTTTACTACTGAATTTGTTTAAGCTCTGAGTGGCCTTACAGTGTTAACTGAAGTATGTAGAATGAAGTGCTACCTGTAGGATGTTAC TGATTCCCATTGATTGTTAATTACTTTGGCATATTTTTATGCTATATGACTCTTTGATTGGCTGCTCTTCCATGTTAAATGTTTGACTTAAATGAGTATT AATACTGCATACCGTAAGTTCTAGTGCAGTGGAGTTTCTTACAATTAAGTTTTCAACTTCTGTAAATTATTGCCACCTTATGTTTGATTATGATGGCTAC ACATGCTCTTTTTTTGTATTTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_183615; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517391
| Blastp | WD40 repeat-containing protein HOS15 from Arabidopsis with 34.75% of identity |
|---|---|
| Blastx | WD40 repeat-containing protein HOS15 from Arabidopsis with 72.19% of identity |
| Eggnog | f-box-like WD repeat-containing protein(ENOG410XRSY) |
| Kegg | Link to kegg annotations (AT5G67320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458457.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |