Ll_transcript_517827

• Id Trinity: TRINITY_DN51269_c0_g1_i11
• Name Transcript: Ll_transcript_517827
• Sequence: ATTTAATAAAATAGAGATAGAAATAAATATTTACTTAAATGAGTAAAAACAAACAAAAAAGAAAGTAATGAGTTTCATTTGATTTGCTCTTTAATTTGTT CTCTTCTTTGGTCTTTGGCTGAAGAACAACTCAATCTCACTCCATTTCCATTTCCATTTCCATTTCCATTTCGGTTTCTCCTTTTTCCCTTTCTTCGATC TCTTCACTTTCTCTTTCAACTTTGAATACCTTATCTTCACCGTACTTAAGTTAAAGTGTTCTTCACACAGGTTTTTTTAAGGTGGTTCAATTTACAATTT CTGATGCTGAAGATATAGTAAAATCTGAAGGCTATTCTCGTCTGTGTGAAAATGGATGGTGCGTCAAAGTTCCATGGAATGATAGACCTGAACAAGCATA ATAACTATTATGATGTCTCTGAAGATTTTTACCATAAGCTTGGGGAGGGTACCAATATGTCACTTGAAAGCATTGGGAGCTTGCAAACAGGTAATGACGG AGGATCTGTTGCGATGTCTGTTGATAATAGCAGTGTTGGGTCCAATGATTCCCATACCCGGATGTTGGATCACCAAGGATTGAAGAGGCGTGCCAATGAT AACTACTCTGTTGCACACAGTGTCAATCATCGAGGAGGAGTCATACATGCTTTAAGCGATGATGCTCTGGCTCGAGCTCTTATGGACAATAGTTCTCCAA CTGAGGGCCTTGACAATTTTCATGAGTGGACAATTGATTTGACGAAGCTTAACATGGGTGAGGCTTTTGCCCAAGGAGCTTTTGGGAAACTCTATAGGGG TACTTACAATAATGAAGACGTTGCTATCAAAATCTTGGAGAGGCCAGAAAATGATCCATCAAAGGCTCAATTGATGGAACAGCAGTTTCAGGCTGAGGTC ATGATGCTGGCTACGCTAAAGCATCCTAACATAGTCCGTTTCATTGGTGCATGCCATAAGCCAATGGTATGGTGCATTGTAACTGAGTATGCCAAAGGTG GTTCAGTTCGACAGTTTTTAAGGAAGCGTCAAAACCGATCAGTGCCTCTCAAATTGGCTGTCAAACAAGCTTTGGATGTTGCAAGGGGAATGGCATATGT TCATGGCCTTGGATTTATCCACAGGGACTTGAAATCTGATAATCTTTTGATTTTTGGTGACAAATCTATTAAAATTGCGGACTTTGGAGTTGCCCGGATT GAAGTGCAAACTGAAGGAATGACACCTGAAACTGGAACATATCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCCTACACTCAAAAGGTGGATATAT ATAGCTTTGGGATAGTTCTATGGGAACTCATCACTGGAATGCTTCCATTTCAGAATATGACAGCAGTACAGGCAGCATTTGCAGTTGTCAACAGAAATGT TCGCCCAATTATACCCAATGATTGCTTGCCTATTCTCGGTGAGATCATGACAAGATGCTGGGATCCCGACCCTGATGTTAGACCACCGTTTCCTCAAATT GTAGGAATGCTAGAGAGCGCGGAGACTGAGATCATGACAACAGTGCGGAAGGCTCGTTTCAGGTGTTGCATCGCCCAACCAATGACCGCTGACTGATCCC GGTAAACAAATAAAAAAAGAAGACATAAAAACATAAACTGCAAAAATTGGTGGGAGGATGAGACTCCGGTAGTAAAAGGGTGACTATATATTATAGTTTT GTGTATCTGTGTGTTTAATCTTTTTCCTTTCAGAACTTGAGAAATCAAAATCTTATCTGGATACCTTTTGTTTATTTGGTTTCTGTTTATGTCTATTCTG AATTAGTAAAGAGGAGATTGTGTATGCAATACATGCATGCACTACAGTTATGTATAGCTTCTTAAAGCCAGATGGAATGAGTTCCTGAACTAAAACTTTT TATTGTGTATTTTGTACTACCACAGCTAACCCGGTCACCGAGGTTGCGTCACCGAGGTTGCGTCTCATACCACCACCCTCCCTTTTGGTTTATCTGGAAA ATGTTTCCAGATTTCATAAACATATTTTCTGAAGTGTTGCAAAATTACTTTTCAGAAACACCTTTCTGGAAGAACCACTTCTGGAGACATGTTCCAGAAT GGGCGGGTGGTGGTGGCATTAGAAAAACGGAAAACTCCAGTGGTTGGATTAGTGCCTGGTAGGATACTCGATTGTTGATTTTTCCCAAGTTATGCATATT TTGAGTCTGCCCTATATACTGGGTATTATGAGTAAGAAATACTGTAGTTGATCTATCAGTGTGGTAAAAATGTAGCAGCGGGTGTAGCTATCATCTATCT CTAGTATCTTACAGTGTCTACTTCAATCTGTTCTACTATTCACAGTCCATAAACATTATATCCTTATATTAGGAGATAACTTATCTCCTCCGGTTAGTAA AAGAATGAC
• Tissue: pods
• Gene name: LI_gene_183621;
• Additional information: details;

Expression of Ll_transcript_517827

FPKM

• PAB: 11.7
• PNAB: 13
• PS1: 22.7
• PS2: 14.5
• PS3: 20.9
• PW1: 9.7
• PW2: 13.6
• PW3: 11

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517827

• Blastp: Serine/threonine-protein kinase HT1 from Arabidopsis with 50.57% of identity
• Blastx: Serine/threonine-protein kinase HT1 from Arabidopsis with 50.57% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G62400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446469.1)
• Pfam: Protein tyrosine kinase (PF07714.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;