Ll_transcript_517958

• Id Trinity: TRINITY_DN51270_c2_g1_i11
• Name Transcript: Ll_transcript_517958
• Sequence: GGAAGAACTAACAAAGTATGTAAATGTTTACTAACATTTATTTATTTAAATCAAGTAAATTCCAAGTGATTTTATTAAACCCCCCCGTTGATCACCCATT TCCCAGCTTTCTTTTTATTTCGTTCTCGATTCTCTTGGCGATCCTATCACCTCTTCCATTCAACCAGGTTTCGGAAACAATTGACATCGCATCATTTTTT CGTTTTCACGCGCTTCCTTCTTTTGCTATCTCAACAGTGGCACCGGTTTTCTCACTACTCTTATCGCTCTCTCGGGGCATCCAAGATAACATTGTGGCGT AATTGCTATGGACCCATCTATTGTGAAGCTTCTTGAAGATGATGAGGATGAAACAATGCATTCAGGGGTGGATTTGGAAGCCTTCCAGGCTGCCTTAAAT AGAGATATCGGAGGAGATGCGTCTGCTTCTCAGCCGTCTGGTTCAGACAATGTTTTGTCTCAAGGAAGTAATAATACATTCAGTCAGACAATAAAACAGT GGCCAACTTCCACCCTTGACAAGCGAGCTGACAGTCAAAGTCAAGAGCCTAAAACTGCACAGCAGCAAGAGCAACCTTCATCTGAGGCGGAGCTGAAGCA ACATGTATCCCTTATGGAACAACCACAGCATGTTGCTTCTCAGATTCTTAATAATCCTCCCTTTTCACAAAAACAATCTCAAGATGAATTTCATCAATCA CAGAACATACAAGTTTCCGTCCAAAATTCTCAAATGAGTGGAATTCAAAGTTCTGGAAAAGATCCTGTCCATAATCATGAGGTAGTCCAAACACATAACC CCAGTAATGAATCTCAGTATGCGAAGTTGCAGCAGATCAGTAACCAACAGGATAGCTTCGTTGAGCAGCCAAGCAGCCAAATGAACCATACTAATAAACA GGTACCATTTGGCCTGTTGCTACCCATCTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTCTATTTACTAAATTGAAGAAAGATGAA ATTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATTGTAGGGGACCAGATGCTTAGATTAGCAATAATAAAAGTGCAACAGGTTGGCAGCAAACATG GTTTGTCTTGTTTTATGGATAGTTTTTATTAAAGCAGTTAAATATTGATGTCAAGTTTGTGCTAAATTTCATCCATTTCTGCTGTTATAGACAAGGCCCA ACCAAGGACCTTCTGGGCAGCAACCTGTTGTAAGGATGCCAGCTGTAGGTTCAGGTGCAAGACAATTTAATGATCC
• Tissue: pods
• Gene name: LI_gene_183630;
• Additional information: details;

Expression of Ll_transcript_517958

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.8
• PS2: 0.4
• PS3: 0.2
• PW1: 0.3
• PW2: 0.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517958

• Blastp: Transcription initiation factor TFIID subunit 4b from Arabidopsis with 45.02% of identity
• Blastx: Transcription initiation factor TFIID subunit 4b from Arabidopsis with 44.07% of identity
• Eggnog: RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410XQS6)
• Kegg: Link to kegg annotations (AT5G43130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429836.1)
• Pfam: RCD1-SRO-TAF4 (RST) plant domain (PF12174.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;