Ll_transcript_517950

• Id Trinity: TRINITY_DN51270_c2_g1_i5
• Name Transcript: Ll_transcript_517950
• Sequence: GTTAATAAGGTTTTCATTATTATTCATTAGGTGTTTGATGAAATGCCTCAATCAACTTTTTTTAGTTAAAACATTACCATTGTTTTTTTATCAAGGTTTT AGTATTGCATAAGTCTATTTATAACGATGGGTTAAGTTTTTTTTTGTGTGTTTGTGTTTCTTTTTTTGTGATGAATTTGCTTTCCATGAGCAAGATTCAT TTTTAACTTTTTGTGTGTTTGCTTCTTTGTTGCAGCAAGATTCATTTTTTACTATGTTTCTAGTGTTGGTTTTGCTAATGACAAAGATGGTGAGGATGGT GGTACAAGGAAGTGGTTAGAAGTTGAGAAAAAATATGTTGCCATTATTATATTTCTTTTTTTCTTTTCCTTGTTTTGCTGTATTTTGTTGTTCGTTAAAA TCCAAAAGACAAGGCAATTTGGAACCTTTTGAGTACAGTGGATATTTTCATGTAGTACAGTGATGAAAATGTTAAGGCTTTTTCCTTTTTCTTTTTAGCT TAAAGTTTAAACTTAGTTAGCAGAAGCACATCTACGGATATTATTTCTAAACTTCATAAAATACATACTATATAAATTTGATAAGTTATTTAACCAAAGA GTTATAGTAGGATAGGGGTTTTCATTGTGGTCTTACGTAGTAAAGCTTGTTGGTTCGATATCACAAATTTTAATATAATAAAGAAGTACTAATAAAAAAT ATTTTAAAATAAATTATAGCAAAAAGTATTACAAATATTTTTACTTTTTCTTTAGATATTTATTAAAACAATGTTTTAAAAAAATTCTAATATAAATGCA TTAAATAATATTTTTAAAAAAATTAATTTTTTGTATGGGAACGACAAAAAGACTAAATTTTTATGGGACTAAAATGATATTTAATATTTAATAGAAACTA ATATGATAGATACCAAATTTGTTGGGGAATAAAATGGTGTTTACTTCTTTTTTTAATTATGAAACCAACAAATATGCTTTCGTAACCCTTCATGTGCCAT TATATGTTATTGGTTAAAAAAAATATTTAAATTAAAAAAAATAATTATTAATCATATTATGACCAATCATAAATGGTGGTGGTACATAGAGTGAACTTAT GTGGGAGAGAAGATGTCCCCCGAACCAAACAGACACATGATCTGTATCATTTAGTTTCATCCTCACCTTTGTATATTCTACAATTTCTTAAGGTTTATAA ATAAACTTCGAAATCCTCAATAAGAAGAATCTCTCGTTAATCATCCTTTACCTTCTTTTATTTCGCTCTCGAATCCTGTTATTGGATAATTCTTTTTGTT CTCGTTTGATTGGTACCTCAACAGCGCCACCGGTTTTCCAATTCCTGTTATTCCTCTCTCTTGGATCATTCAAGACAAACATTGTTTTGAAATTGATATG GACCCGTCTATTGTGAAGCTACTGGAAGATGATGAGGACGAGACGATGCATTCTGGGGTGGACTTGGAAGCGTTCCAGGCTGCCTTAAATAGAGATATTG GAGGTGGTGCGTCTGCTTCTCAGCCTTCTGGTTCAGAGTCCGCTTTGTCTCAAGGAATCAACAACTCATTCAGTCAGGCAATGCCACAGTGGCCAACTTC TAGTCATGACAATAGAACTGACGGTCAAAATCAAGAGTCTAAAACTGCGCAGCAGCAAGAGCAACCTCCGTCTGAGGTGGAGCTGAAGCAACATGTATCT CTTCCTGAACAACCCCAACATGTTGCTTCACAAGTTGTAAATAATCCTCCCTTTTCACAGAAACAATCTCAAGATGAATTTCACCAATCGCAGAATGTAC AAGTTTCCGTCCAAAATTCTCAAATGATTGGAATTCAAAATTCTGGAAAAGATCCTGTCCATAATCACGAGATAGTCCAAACACATAACCCCAGTAATGA ATCTCAGTATGCGAAGTTGCAGCAGATCAGTAATCAACAGGATACCATTACTGAGCAGCCAAGAAGCCAAATGTACCGGCCTATTAAACAGGTACCATTT GGCCTGTTGCTACCCATCTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTCTATTTACTAAATTGAAGGTGGGTTTCTTACTCAAAC CAATCTCACTAATAGGTCTTGTTGCCTCCTCCTCTTATAATGTGCTATTAGAGTAATTTGGCTCATGCCTTAGACTTATAGTTTAGTGTAGTTACATATA TTAGTGAATCATGGCTAAATAGTTTCTGAGCTAAGTTACTGATGTACTCAGCATTCAGCCTTCCATATATAGTGCAAGTTAGCTAAGTCTTAATAATTTT GTTACTAATTTTCTGTTTTGTCGATTTTTTGTTTGTTTTCCATTCTAGAAAGATGAAATTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATTGTAG GGGACCAGATGCTTAGATTAGCAATAATAAAAGTGCAACAGACAAGGCCCAACCAAGGACCTTCTGGGCAGCAACCTGTTGTAAGGATGCCAGCTGTAGG TTCAGGTGCAAGACAATTTAATGATCCACATGCTTTAGCACAGCTGCATCAGAGAAGTATGAATGCGGCTGCAGATCAATCTCGTATGACTTCTTCGGCT GTCCAGAATGTGGGGAGCAATGCTAGAAATTCTCAGGAATTGGATGCTAAAATAGAATCTCAAGGATCACAAACAAGCCAATTACCACCTTCCAGTTCCA ACGTTGTTAGTCAAGAAACAGAAAGATCGTCAGTTCACATACAAGGGCTTACTAAGCAGCAGCAACAACATCTACATTTCTCTTCTGCACATGGAAGTAG TGGTGGTAATTATAACCCCTTTTCTGGGACAACCAGTAGTTCCATTTCATCTATCAACCCACAACTGCTTGATTCACACTTGGGTCAAGCTCCACATCAA AACACTGGTCAGAACCACTTAGGTGGGGCAACACAAGGTTTGAATGTCATCGGTATGCCAAAACATCAACAGCAGAATTCTTTCAGTGGCCCCAAGAGGC TACCTGGTGGGTCTGTCTCTTCCATGGTAAATAATTCAGCACCCCAGCAAACTTCCAATGCTGGGCAACCATCAATAAACAAAGAACAAAAAGTGGGCAT GTTGTCATCTGTTTCTTATGTGAAAAAGGAACCTAGTGACCTGTCTACAGAGCAGCAACATAGGCTTAATTTGTCTAAATTGCATGGCTTGCATTCTGTT AATTCTGCTCAGATTGAACAAGGTAGTGCTAATCAAGGAAGTGTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCCTCCACAAACATGCCACCGACAACAT TCCAACACAATTCTTCTGCTTCCTCATCTGTAATGACCCAACCAAACCCTAGTGTCTCTATCCCATCAAACACTTCTGGGATTATGGCAAGGGCACCTTT GAAAAAGCCTTCTCTTGCCCAGAAGAAACCGCTTGAAGCACTTGGTTCCTCACCTCCTCCACCAAGTAAGAAACAAAAAACATCTGGGGGATCTGTAGAA CAAAGCATTGAGCAGCTTAATGATGTCACTGCTGTTAGTGGAGTTGATCTTAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAGGAGGACAGTCGAG TTTCAGAAGCATCTCGAAGAGCTGTGCAAGAAGAAGAGGAAAAGCTGATTTTTCAGAGAACTCAATTGAATAAAAAACTGGTCGAGATTTTGGTCAAGTA TGGCTTGAAGGGTATTGGCAATGATGTAGAGAGATGCTTGTCACAGTGTGTGGAAGAACGAATGCGTGGACTAATAAGTAACCTGATTAGACTGTCAAAA CAGCGGGTTGATTTTGAGAAGACAAGACATCGGACTGTTGTCACCTCAGATGTTCGGCAGCAAATCACGATAGTAAATAGAAAACTAAGGGAAGAGTGGG AGAAAAAA
• Tissue: pods
• Gene name: LI_gene_183630;
• Additional information: details;

Expression of Ll_transcript_517950

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.4
• PS2: 0
• PS3: 0.3
• PW1: 0.3
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517950

• Blastp: Transcription initiation factor TFIID subunit 4b from Arabidopsis with 44.15% of identity
• Blastx: Transcription initiation factor TFIID subunit 4b from Arabidopsis with 44.28% of identity
• Eggnog: RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410XQS6)
• Kegg: Link to kegg annotations (AT5G43130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429835.1)
• Pfam: Transcription initiation factor TFIID component TAF4 family (PF05236.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;