Ll_transcript_517956

Id TrinityTRINITY_DN51270_c2_g1_i9
Name TranscriptLl_transcript_517956
SequenceGTTAATAAGGTTTTCATTATTATTCATTAGGTGTTTGATGAAATGCCTCAATCAACTTTTTTTAGTTAAAACATTACCATTGTTTTTTTATCAAGGTTTT AGTATTGCATAAGTCTATTTATAACGATGGGTTAAGTTTTTTTTTGTGTGTTTGTGTTTCTTTTTTTGTGATGAATTTGCTTTCCATGAGCAAGATTCAT TTTTAACTTTTTGTGTGTTTGCTTCTTTGTTGCAGCAAGATTCATTTTTTACTATGTTTCTAGTGTTGGTTTTGCTAATGACAAAGATGGTGAGGATGGT GGTACAAGGAAGTGGTTAGAAGTTGAGAAAAAATATGTTGCCATTATTATATTTCTTTTTTTCTTTTCCTTGTTTTGCTGTATTTTGTTGTTCGTTAAAA TCCAAAAGACAAGGCAATTTGGAACCTTTTGAGTACAGTGGATATTTTCATGTAGTACAGTGATGAAAATGTTAAGGCTTTTTCCTTTTTCTTTTTAGCT TAAAGTTTAAACTTAGTTAGCAGAAGCACATCTACGGATATTATTTCTAAACTTCATAAAATACATACTATATAAATTTGATAAGTTATTTAACCAAAGA GTTATAGTAGGATAGGGGTTTTCATTGTGGTCTTACGTAGTAAAGCTTGTTGGTTCGATATCACAAATTTTAATATAATAAAGAAGTACTAATAAAAAAT ATTTTAAAATAAATTATAGCAAAAAGTATTACAAATATTTTTACTTTTTCTTTAGATATTTATTAAAACAATGTTTTAAAAAAATTCTAATATAAATGCA TTAAATAATATTTTTAAAAAAATTAATTTTTTGTATGGGAACGACAAAAAGACTAAATTTTTATGGGACTAAAATGATATTTAATATTTAATAGAAACTA ATATGATAGATACCAAATTTGTTGGGGAATAAAATGGTGTTTACTTCTTTTTTTAATTATGAAACCAACAAATATGCTTTCGTAACCCTTCATGTGCCAT TATATGTTATTGGTTAAAAAAAATATTTAAATTAAAAAAAATAATTATTAATCATATTATGACCAATCATAAATGGTGGTGGTACATAGAGTGAACTTAT GTGGGAGAGAAGATGTCCCCCGAACCAAACAGACACATGATCTGTATCATTTAGTTTCATCCTCACCTTTGTATATTCTACAATTTCTTAAGGTTTATAA ATAAACTTCGAAATCCTCAATAAGAAGAATCTCTCGTTAATCATCCTTTACCTTCTTTTATTTCGCTCTCGAATCCTGTTATTGGATAATTCTTTTTGTT CTCGTTTGATTGGTACCTCAACAGCGCCACCGGTTTTCCAATTCCTGTTATTCCTCTCTCTTGGATCATTCAAGACAAACATTGTTTTGAAATTGATATG GACCCGTCTATTGTGAAGCTACTGGAAGATGATGAGGACGAGACGATGCATTCTGGGGTGGACTTGGAAGCGTTCCAGGCTGCCTTAAATAGAGATATTG GAGGTGGTGCGTCTGCTTCTCAGCCTTCTGGTTCAGAGTCCGCTTTGTCTCAAGGAATCAACAACTCATTCAGTCAGGCAATGCCACAGTGGCCAACTTC TAGTCATGACAATAGAACTGACGGTCAAAATCAAGAGTCTAAAACTGCGCAGCAGCAAGAGCAACCTCCGTCTGAGGTGGAGCTGAAGCAACATGTATCT CTTCCTGAACAACCCCAACATGTTGCTTCACAAGTTGTAAATAATCCTCCCTTTTCACAGAAACAATCTCAAGATGAATTTCACCAATCGCAGAATGTAC AAGTTTCCGTCCAAAATTCTCAAATGATTGGAATTCAAAATTCTGGAAAAGATCCTGTCCATAATCACGAGATAGTCCAAACACATAACCCCAGTAATGA ATCTCAGTATGCGAAGTTGCAGCAGATCAGTAATCAACAGGATACCATTACTGAGCAGCCAAGAAGCCAAATGTACCGGCCTATTAAACAGGTACCATTT GGCCTGTTGCTACCCATCTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTCTATTTACTAAATTGAAGAAAGATGAAATTCCGAAAG ACAGTTTTGTGCGGCTTATGAAAGGTATTGTAGGGGACCAGATGCTTAGATTAGCAATAATAAAAGTGCAACAGACAAGGCCCAACCAAGGACCTTCTGG GCAGCAACCTGTTGTAAGGATGCCAGCTGTAGGTTCAGGTGCAAGACAATTTAATGATCCACATGCTTTAGCACAGCTGCATCAGAGAAGTATGAATGCG GCTGCAGATCAATCTCGTATGACTTCTTCGGCTGTCCAGAATGTGGGGAGCAATGCTAGAAATTCTCAGGAATTGGATGCTAAAATAGAATCTCAAGGAT CACAAACAAGCCAATTACCACCTTCCAGTTCCAACGTTGTTAGTCAAGAAACAGAAAGATCGTCAGTTCACATACAAGGGCTTACTAAGCAGCAGCAACA ACATCTACATTTCTCTTCTGCACATGGAAGTAGTGGTGGTAATTATAACCCCTTTTCTGGGACAACCAGTAGTTCCATTTCATCTATCAACCCACAACTG CTTGATTCACACTTGGGTCAAGCTCCACATCAAAACACTGGTCAGAACCACTTAGGTGGGGCAACACAAGGTTTGAATGTCATCGGTATGCCAAAACATC AACAGCAGAATTCTTTCAGTGGCCCCAAGAGGCTACCTGGTGGGTCTGTCTCTTCCATGGTAAATAATTCAGCACCCCAGCAAACTTCCAATGCTGGGCA ACCATCAATAAACAAAGAACAAAAAGTGGGCATGTTGTCATCTGTTTCTTATGTGAAAAAGGAACCTAGTGACCTGTCTACAGAGCAGCAACATAGGCTT AATTTGTCTAAATTGCATGGCTTGCATTCTGTTAATTCTGCTCAGATTGAACAAGGTAGTGCTAATCAAGGAAGTGTAAAGGATGAGTTTTCAAGAGGTC TTCCAGCCTCCACAAACATGCCACCGACAACATTCCAACACAATTCTTCTGCTTCCTCATCTGTAATGACCCAACCAAACCCTAGTGTCTCTGTAAGTTT GAGACCAATATAACTATCTTGTCTTAAGATACAATGGCTAATTTTTGTATGGACCAAATGGTGTCCAACTTTGTTTTTTGTATCATGGGCATTGTGCATC CCTTATTACTTCGTTATATTGTATGCTTATCCAATGTAAACTGTTGATGCATAATTTCCTTTCCCTCTCCTCCTCTGGATCTGATTGGTTAGCTTTCAGA TCCCATCAAACACTTCTGGGATTATGGCAAGGGCACCTTTGAAAAAGCCTTCTCTTGCCCAGAAGAAACCGCTTGAAGCACTTGGTTCCTCACCTCCTCC ACCAAGTAAGAAACAAAAAACATCTGGGGGATCTGTAGAACAAAGCATTGAGCAGCTTAATGATGTCACTGCTGTTAGTGGAGTTGATCTTAGGGAAGAG GAAGAGCAGTTATTTTCAGGGCCCAAGGAGGACAGTCGAGTTTCAGAAGCATCTCGAAGAGCTGTGCAAGAAGAAGAGGAAAAGCTGATTTTTCAGAGAA CTCAATTGAATAAAAAACTGGTCGAGATTTTGGTCAAGTATGGCTTGAAGGGTATTGGCAATGATGTAGAGAGATGCTTGTCACAGTGTGTGGAAGAACG AATGCGTGGACTAATAAGTAACCTGATTAGACTGTCAAAACAGCGGGTTGATTTTGAGAAGACAAGACATCGGACTGTTGTCACCTCAGATGTTCGGCAG CAAATCACGATAGTAAATAGAAAACTAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGAAGAGAAGCTTCGAAAAATTAATGATGTCGAGAACACTACTG GAGTTGATGGTGACAAGGATGAAGGTCGTACTAAATCAACAAAGGTGAACAAGGAAGAGGATGAAAAGATGAGGACAAATGCTGCAAATGTTGCTGCCCG TGCTGCTGTTGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAGGCAGAAACGTGAAGGGGGCACAGATCTGTCATCTGGTTCT CAAACAGCTAAAGATATGAACCGCAAATCTTCATCAGCATTTAGAAGAAGTATGAATGATAATCAAGAAGGGGATAAAAAAGGTCCAACTACAACATCTT CAGGGGCTGCTAGAAAACATGGCAAAAGTCACGCTCTCGCATCTCAAACTCGGGTAGCTCGAAGCATCTCTGTCAAGGATGTAATTGGAGTCCTGGAGAG GGAACCCCAGATGTCCAAATCACCACTCATACATCGCTTGTATGAGAAAATTCATTCTGATGCCCCAGCCGAACAAGGATAAAGTAAGCACCCAAGTGTT CTTAGTTTTGTAATTTTACTCTTTACCAACTGAAATGGAAAGGTTTCCTCAAATTCGGAAGTTTGCCTGTTATTCATGTTCATTTCGTGAGGAGTTTGCT TGCTTTTTGCCCATTAGGTATATCAGATGAAACTCAGCCAGAAAAGTTGGTTTGGTTTTAAGTTAGTGAAACTCTTGTAGAATGGTTAGATTCTATTTCC CATTTTTTGAAACCACAAAAACTGAATCGAACCAAATAGCCTGCAATTATTATTATTTAGCATACGGTTACTATCAAAATTATGAACATATTGGATACTT GTTGTTTGTTATAGTTTTAACTTACTATTATGTTGACAGTTATTATGCAATTGGATAATTAATAATGTTGTAAAACATGTCAAGTGTAGTTGCAAACACA TTTTAG BLAST
Tissuepods
Gene nameLI_gene_183630; 
Additional informationdetails; 

Expression of Ll_transcript_517956

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_517956
BlastpTranscription initiation factor TFIID subunit 4b from Arabidopsis with 36.09% of identity
BlastxTranscription initiation factor TFIID subunit 4b from Arabidopsis with 59.03% of identity
EggnogRNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410XQS6)
KeggLink to kegg annotations (AT5G43130)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_020207987.1)
PfamRCD1-SRO-TAF4 (RST) plant domain (PF12174.7)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;