| Id Trinity | TRINITY_DN51272_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_519021 |
| Sequence | AACAAAAATAAATTTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTCTCTCTTCAATTCATCTCTCTTCTCTTTTCATCTCTTCTCATTTCTTCTC TTTTCGATTCATTATTACATTCTCATCACAATTTTCTACTTTCCCCCTATAATGGATCTTCGTTTCTCTTCAATTCCCTCATGATTTTCATCATTCTACT CATTATGGAATTAAAATCCGTTGGTGGGTTCTTCTTTATTCACCAACTATAGCATCATACTATCTTTTCTTCTTCTTAATTCTCCTTCTTCTTCATAAAG TTTGCTACTTTCAACACTTCATACAAGGAAAAACAAATATTGGGTTACCCTTTTCTATTTATTCATGTTTGTCATTCATAAATGAAACTAGTGAGATTTG GGTAACTGAATTTCGAGTCTCTATGGATGAGGCTCAGGTACCCGTGGCGGCCGCGGCGGTCACCGGTTCGAGATGGTGTCCCAGCCACCTTGCATTTGGT CCTTATGTGTCACAGGGTCAAGGTGGAGGCACTAGTAGTGAAAACAACTCCCAAAAGTTGCGTGTGCTTGTGAGAAAATCTTTGGTAACAAGATTGACCA AGGACATAGTTGAGACATACCAAAATTGCAATCCACAGTTTAAATTCTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCCTCAACTGGAGTGCT TAATGATGGCTATGATAACGTGAACTCAGATCTTATTCTGTCAGTGAATTTTGTCTTGATCCATGTAGAGAAGAATAGAAGATATGTTGTCAAAGATGTC CTTGGCCATGGAACATTCGGACAAGTGGCTAAATGCTTGGATTCAGATACCAACAGTTTTGTTGCTGTTAAGATCATTAAAAATCAACCTGCATACTATC AACAGGCACTGGTGGAAGTAACTATTTTAACTACGCTGAATAAAAAGTATGATCCCGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATA TCAACAACATTTGTGCATATGCTTTGAACTTCTGGACACAAACTTATATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTAGTATTGTTCAG CTGTTCTCTAAGCAGATTTTGTGTGGACTGGATCTACTGAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCTGAAAACATTCTTTTATGTACAAGCA CTGTGAAGCCCGCAGAAATCAAGATAATTGACTTTGGATCAGCATGCATGGAAAATCGTACTGTTTACTCCTATATTCAGAGTCGGTACTACAGATCTCC CGAGGTTCTTCTTGGATATCAATACACAACAGATATTGATATGTGGTCCTTCGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGG GCTTCAGAATTTGATCTTTTGAGGCGGATGATTAAAATACTTGGAGGACAACCACCTGATTATGTATTGAGGGAGGCCAAAAACACAAGTAAATTCTTTA AGTGTATCGGCAATCTCCAGAACATAGGCAACAGTGAGAGTTCCGAAAATGGAAGAAGTGTTTATCAAGCACTGACCGAGGAAGAATATGAAGTTAGAGA TTTGAAGAAGCCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTTGAAGCTATTGTTACAAATTATCCATATAAGAAAAACCTACCTAAGGAAGAC ATTGTCAAAGGTTAGGTTTCATATGCTTTAATAAAAGCCGGTAAGGTTGGAAATTTCTGATCAACATGATGTAACAGTTTTGTTTTCTGTGCATGTTTTA TTTTTCTTATTCAAGTTGATGCTGCTAATGAATGTTGTATAAACTGAACTCATTACAGAAAGTCAAATACGATTGGCTCTTATTGATTTTCTGAAAGGGC TTGTTGAACTTGATCCTGCAAAGCGCTGGTCACCCTTCCAGGCTTCAAAACACCCTTTTGTAACAGGGGAACCTTTTACACAGCCTTACAAGCCTCCTCC CAAGACCCCTCGTATGCCGGTAGTTCAAAATATCAAGGTAGATAATCATCCAGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAGGC ATTAACAGAGTTTCCCAATATAGTCCACACTTTCAGATGGTGCAATATCCACCTGCTAACAGTTATGGTAGTGTAGGAAGCCATGGGAGCTATAATGATG GTTTTGCGCATGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACATGTTTGCTTATTATTCACCTGTTGGTCCATCTGGTATGAACATGCACAGTCA GGGAGGTATGTCAATGCTTGGAAATACTCCTGATGCCCGGAGGAGACTGAAGTATCAACCTGCGAATGGGCTAGGTATAAGCCCATCGGCCGGAAATTTT TCCTCCCTGCCCCTTGGTGCCAGTCCATCTCAATTTACTCCACCAAGTTCCTTTGGTCAGATGTCAGTTGGTTCTCCAGGACACTATGGACCTACATCTC CTGCAAGAGGAGCCTCTCATGGATCACCTTTAGGAAAGGCAGCTGCAGCTAGCCAGTTCAACAGACGAAAAAATTGGGGATTTTCTGGAAGTCCTCAAAC TAAAGAAACAACATTTTCTTCACACTTCCAAGGTCAATCTCATGATGGCTCGAACCATGCTGAGGGAACATCACAAGCTCTTGGCAGTTCTCCATCGTAT CTGCAGACAAATATTAATCCTGGAAGCTGGAAGCAGCGAGGAAGTGGAGGGATTATTGCTAATCATAACATGACAGCTATGCCTACTTCTAATGTTAACT TGCAGTCAACAGAATTGGCTCGTGACAATGCAGATGCAGGCCTATCGTTGCCTGATCCTGCAGATTGGGATCCTAATTATAGTGATGAGCTTCTCCTGCA AGAGGATGGTTCAGATGAAAGCTCATTGACTACTGAGTTTGGAAGAAGTATGAATCTTGGTTCCACTGAACCATGGGTTAGATCAGGAAGGTTCAACCAG ACCTCTAGCACAAGCTCTCCATTAATCATACAGAGACAAAATGCAACAGGTCCAACATTTTCTAATGTAGAGATGAGTAGCCCTCCAATGCATGATCTTC AAGGAACATATAATATACCTTCTATGTCAAAGCCTTATCATCACATGCCTCATATTTCACAAAATTCTCCAAGCCGTTTTGGACACCAACATGTTCAAAG ATATCCACATGGTAGACCCCCTCATGGTGGAGATTGGAATCAAATTAAGGTTCAACCTTCTTCCGGATTCAGCGGTCCGGGCCAACGCTCTCCCAGGAAT AACTCATTCACCAATAGTATGCCATGGGGGAGAAGAATGAATCCTGCTATGTCAAGCATACCTCCAACATCTCGTGCAAGAAATGATTATGCAAGTATAA ACTAGCATTGGTTTGGTTCACTTCAGTGTTGGCTATTTAAATTATTGTGGTTCATGATTATTAAAGTAGTATGAAGAATTATAAAGAAAATGGAAGGATG AAAAAGGGGTACCCTTCAATGCCCTTGTATCTTTCATCATTTATTTCTTCTCCTACTTTCAGCTTCATTTCTTTGGCCATAAAATTAATCTGCTTCTGCT TTATGAATTCTTTACTTGCTTGTGTGCTAAAGCTAAACAATTATGATGTCCAATTTTGGCTTCTCAATGTCTAAATTTGTGGCTAAAAGATTAAGAAAAT TGCTAACAATATTGTCAAAGTTGTTTAGTTGGGATGTAAGGAATACAAATGTTTAGTTTTGTCATGTAAAACTGGATTGTGAGTAATACAAATTGTAGAT TTATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_183645; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519021
| Blastp | - |
|---|---|
| Blastx | Serine/threonine-protein kinase ppk15 from Schizosaccharomyces with 52.15% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421655.1) |
| Pfam | - |
| Rfam | - |
| GO | - |