Id Trinity | TRINITY_DN51272_c1_g3_i7 |
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Name Transcript | Ll_transcript_519026 |
Sequence | AACAAAAATAAATTTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTCTCTCTTCAATTCATCTCTCTTCTCTTTTCATCTCTTCTCATTTCTTCTC TTTTCGATTCATTATTACATTCTCATCACAATTTTCTACTTTCCCCCTATAATGGATCTTCGTTTCTCTTCAATTCCCTCATGATTTTCATCATTCTACT CATTATGGAATTAAAATCCGTTGGTGGGTTCTTCTTTATTCACCAACTATAGCATCATACTATCTTTTCTTCTTCTTAATTCTCCTTCTTCTTCATAAAG TTTGCTACTTTCAACACTTCATACAAGGAAAAACAAATATTGGGTTACCCTTTTCTATTTATTCATGTTTGTCATTCATAAATGAAACTAGTGAGATTTG GGTAACTGAATTTCGAGTCTCTATGGATGAGGCTCAGGTACCCGTGGCGGCCGCGGCGGTCACCGGTTCGAGATGGTGTCCCAGCCACCTTGCATTTGGT CCTTATGTGTCACAGGGTCAAGGTGGAGGCACTAGTAGTGAAAACAACTCCCAAAAGTTGCGTGTGCTTGTGAGAAAATCTTTGGTAACAAGATTGACCA AGGACATAGTTGAGACATACCAAAATTGCAATCCACAGTTTAAATTCTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCCTCAACTGGAGTGCT TAATGATGGCTATGATAACGTGAACTCAGATCTTATTCTGTCAGTGAATTTTGTCTTGATCCATGTAGAGAAGAATAGAAGATATGTTGTCAAAGATGTC CTTGGCCATGGAACATTCGGACAAGTGGCTAAATGCTTGGATTCAGATACCAACAGTTTTGTTGCTGTTAAGATCATTAAAAATCAACCTGCATACTATC AACAGGCACTGGTGGAAGTAACTATTTTAACTACGCTGAATAAAAAGTATGATCCCGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATA TCAACAACATTTGTGCATATGCTTTGAACTTCTGGACACAAACTTATATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTAGTATTGTTCAG CTGTTCTCTAAGCAGATTTTGTGTGGACTGGATCTACTGAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCTGAAAACATTCTTTTATGTACAAGCA CTGTGAAGCCCGCAGAAATCAAGATAATTGACTTTGGATCAGCATGCATGGAAAATCGTACTGTTTACTCCTATATTCAGAGTCGGTACTACAGATCTCC CGAGGTTCTTCTTGGATATCAATACACAACAGATATTGATATGTGGTCCTTCGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGG GCTTCAGAATTTGATCTTTTGAGGCGGATGATTAAAATACTTGGAGGACAACCACCTGATTATGTATTGAGGGAGGCCAAAAACACAAGTAAATTCTTTA AGTGTATCGGCAATCTCCAGAACATAGGCAACAGTGAGAGTTCCGAAAATGGAAGAAGTGTTTATCAAGCACTGACCGAGGAAGAATATGAAGTTAGAGA TTTGAAGAAGCCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTTGAAGCTATTGTTACAAATTATCCATATAAGAAAAACCTACCTAAGGAAGAC ATTGTCAAAGAAAGTCAAATACGATTGGCTCTTATTGATTTTCTGAAAGGGCTTGTTGAACTTGATCCTGCAAAGCGCTGGTCACCCTTCCAGGCTTCAA AACACCCTTTTGTAACAGGGGAACCTTTTACACAGCCTTACAAGCCTCCTCCCAAGACCCCTCGTATGCCGGTAGTTCAAAATATCAAGGTAGATAATCA TCCAGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAGGCATTAACAGAGTTTCCCAATATAGTCCACACTTTCAGATGGTGCAATAT CCACCTGCTAACAGTTATGGTAGTGTAGGAAGCCATGGGAGCTATAATGATGGTTTTGCGCATGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACA TGTTTGCTTATTATTCACCTGTTGGTCCATCTGGTATGAACATGCACAGTCAGGGAGGTATGTCAATGCTTGGAAATACTCCTGATGCCCGGAGGAGACT GAAGTATCAACCTGCGAATGGGCTAGGTATAAGCCCATCGGCCGGAAATTTTTCCTCCCTGCCCCTTGGTGCCAGTCCATCTCAATTTACTCCACCAAGT TCCTTTGGTCAGATGTCAGTTGGTTCTCCAGGACACTATGGACCTACATCTCCTGCAAGAGGAGCCTCTCATGGATCACCTTTAGGAAAGGCAGCTGCAG CTAGCCAGTTCAACAGACGAAAAAATTGGGGATTTTCTGGAAGTCCTCAAACTAAAGAAACAACATTTTCTTCACACTTCCAAGGTCAATCTCATGATGG CTCGAACCATGCTGAGGGAACATCACAAGCTCTTGGCAGTTCTCCATCGTATCTGCAGACAAATATTAATCCTGGAAGCTGGAAGCAGCGAGGAAGTGGA GGGATTATTGCTAATCATAACATGACAGCTATGCCTACTTCTAATGTTAACTTGCAGTCAACAGAATTGGCTCGTGACAATGCAGATGCAGGCCTATCGT TGCCTGATCCTGCAGATTGGGATCCTAATTATAGTGATGAGCTTCTCCTGCAAGAGGATGGTTCAGATGAAAGCTCATTGACTACTGAGTTTGGAAGAAG TATGAATCTTGGTTCCACTGAACCATGGGTTAGATCAGGAAGGTTCAACCAGACCTCTAGCACAAGCTCTCCATTAATCATACAGAGACAAAATGCAACA GGTCCAACATTTTCTAATGTAGAGATGAGTAGCCCTCCAATGCATGATCTTCAAGGAACATATAATATACCTTCTATGTCAAAGCCTTATCATCACATGC CTCATATTTCACAAAATTCTCCAAGCCGTTTTGGACACCAACATGTTCAAAGATATCCACATGGTAGACCCCCTCATGGTGGAGATTGGAATCAAATTAA GGTTCAACCTTCTTCCGGATTCAGCGGTCCGGGCCAACGCTCTCCCAGGAATAACTCATTCACCAATAGTATGCCATGGGGGAGAAGAATGAATCCTGCT ATGTCAAGCATACCTCCAACATCTCGTGCAAGAAATGATTATGCAAGTATAAACTAGCATTGGTTTGGTTCACTTCAGTGTTGGCTATTTAAATTATTGT GGTTCATGATTATTAAAGTAGTATGAAGAATTATAAAGAAAATGGAAGGATGAAAAAGGGGTACCCTTCAATGCCCTTGTATCTTTCATCATTTATTTCT TCTCCTACTTTCAGCTTCATTTCTTTGGCCATAAAATTAATCTGCTTCTGCTTTATGAATTCTTTACTTGCTTGTGTGCTAAAGCTAAACAATTATGATG TCCAATTTTGGCTTCTCAATGTCTAAATTTGTGGCTAAAAGATTAAGAAAATTGCTAACAATATTGTCAAAGTTGTTTAGTTGGGATGTAAGGAATACAA ATGTTTAGTTTTGTCATGTAAAACTGGATTGTGAGTAATACAAATTGTAGATTTATT BLAST |
Tissue | pods |
Gene name | LI_gene_183645; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519026
Blastp | Serine/threonine-protein kinase ppk15 from Schizosaccharomyces with 52.17% of identity |
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Blastx | Serine/threonine-protein kinase ppk15 from Schizosaccharomyces with 52.32% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC823.03) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421655.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |