Id Trinity | TRINITY_DN51278_c0_g4_i5 |
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Name Transcript | Ll_transcript_516963 |
Sequence | TTATAAATACACCCCTCATATTTATATGGTTATTACTGTACTACAGTTAGATTCTCCTTTGTTTTTTTTTTGTATATTTACATTGTCTGTTGCTCTTTTG ACCATATTTGAAGTGAAGAAACCATACATAATATGTGCTCTTAAAAGGTACTATTTTCAATAATTGATATTTTTTTGGGCCATCGACTGAAAAAAGGGGA AATCTTTGACCTTTATGTGTATGACAATTAGTGGCAACAATTATGTTAAATGGGCATTTCATATTACATCATATAGCTATAATATTTGACATTATAACAA AATGACATTATTGTAAACAGCAAGGTTATCCATACAAGTGGTGCATGATCCATCACAATCATTGAAATAATAGGGAGTATGGTGTGTATTGTGTAATAGC CACTAAATATGAGATAAGTGAAGAAACATATGTCTCTGTTAAATTGGCTGCCTAAACATGCATAGACTTGGAGGCTAAGCTAGCAAAAGTCATTCCCATT TGCTATCTCTGCATTGCATTAGCTGCACTTTCTCTTTGCAATTCCTTCTTCATTTGCATTCCCTATTTAAATGGCTGGAGCTTTGGTTAGTGGTGCTGTT CTGTCTGCATTCCTTCAAGTTGCTTTTGATCGCTTGGCTTCTCCTGCTGTCCTGGACTACTTCCGAGACAAAAAACTCGATGACAAGTTACTTAAGAGGA TGAAAGTTTTATTGTTATCCATTAATGCTGTTGTTGATGATGCTGAGGACAAAAATTACACCAATCAGCATGTTAGTGAATGGCTTGATATGGTCAAAGA TGCTGTGCTTGATGCTGAGGATCTATTGGATGAGATTCACACTGAAGCCTCCAAGTCAAAACTTGAAGCTGAATTTAAGACAGCCAACACTAGTAGTAAG GTATGGAGATCCTATTTACCTGTTTCAGTTAGTTCTTTTGATAAGCAACTGCATTCAAGGATGGAAGAAATCCTTGACAACCTAGACTCTCTTGCGAGGG AAAAGGATGTTCTGATATTGGAAAAGGGTCATGGTGTTGGTATTGGCCTGGGAGAGAATGTATCAGAAAGGCAAACAACATCTTTCGTGGATGAAGCAGC TATATACGGTAGAGATAGTGACAAAAATGTTATTGCCGATTTGTTGCTATCGGACAGTGGAAAAAACCTATCTGTCATTTCTATTGTGGGTATGGGCGGG ATGGGTAAGACCACCGTTGCTCAACTTGTATGCAAAGATAGCAGGGTGAAGGATGAGTTTCAGTTCAAAGTGTGGGTCTGCGTTGGTGGGAAGTTGGATA CTGTCAGGGTGACTAGAAAAATTCTTGAAGCACTTACTTTGCCAACTAATGATATAGAGGACTTGAATTCGCTTCAAGTTAAGTTGAAGGAAAAGTTAGC AGACAACAAATTTCTTCTTGTTTTGGATGATGTTTGGGATGAAAATTACTTAAATTGGGAACGTCTGAAAGCTCCTTTTGTTTGTGGGGCTCAGGGAAGC AAAATCCTTGTAACCTCGCGGAGTAAGAAAGTTGCTTCAGCAATGCGATGTGCACATGTTCATCAACTGGAGAAATTGCTAGAAGAACACAGTTGGTTGT TATTTGCTAAATATGCACTATGTGATGCTAATTCAACGTCTGGCCTTGAAGAAATCGGAAGAAAAATTATGAAGAAGTGCAATGGTTTACCTCTTGCCTT GAAAGCAATCGGCAGTCTCTTGTATACCAAATTATCTTATGAGGACTGGAATGGAATATTGATTAGTGAGGTGTGGGATATCTCAGATGATGGATGTGAT ATTATCCCAGCTTTAAGATTGAGCTATCAATACCTTCCTTCTCCTCTTAAGAGATGCTTCGCTTATTGTTCCTTAATCCCCAAAGATTATGAATTTGACA AGGACTGTTTAGTGGAGTTGTGGATGGCCGAAAACTTTCTACAGGTCCATAGAATAAATAAGAGCATGAAAGAATTAGGAGATCAGTTCTTCAACGATCT AGTATTGAGGTCATTTTTTCAGCAATCAAGTAGAGAAAGGAAGCTCTTTGTCATGCATGACCTTGTTAATGATTTGGCAACTCATGTCTCTAGAGAATTT TGTTTGAGGTTAGAGAAAGAAGAAGCAAGAAATGCATCAGAAATGACCCGCCATATTTCCTACTTCGGAAATTTTTGTGAAAGTCCTAACAAGTTTGAAT CTATCTACAAGGCTAGCAAATTGCGCACATTCCTACCTTTTCTGTATGGAAGTATGTCTAGTGACATGTTAGATTATTTGTTGTGCAAGTGTAACTGCTT ACGTGTCTTGTCCTTGTGTTCCTCTTTCAGCCTTTTTGAGTTACCAGATTCCATAGGCAACCTTAAGCATTTACGCTATTTGGACCTTTCTTATAGCGGC ATAAAAAAACTACCTGTTTCAACATGTTTGCTTTATAATTTACAAACATTAAAGTTGTCGCATTGTTTACATTTGGAAGAGTTGCCCTCTGATATGCACA AACTCGTAAATTTGCGTCATCTTGACTTCAGAGGGACTAAGGTGAGGAGGTTGCCAAATGGATTGGGAAAATTGAAAAAGCTTGAAGTATTGAGTTCATT TTATGTAGGAAAATGTGGTGAGTCTAATATCAATCAATTAGCTGAACTCAAACTTCAGGGTACACTATCAATTAAAGGGTTGCAGAATGTATCTGATCCC GTAGATGCATTAGCAGCTAACTTGAAAAATAAAATACATCTAGAGACATTATGTTTGGGATGGAGCATGAATGATAATGGATCAGAGAATCAAAGGAATG TACTTGAGAATCTGCAACCGCCTGCAAACTTAAAAGGGTTGATCATTGTACACTACGATGGTACAAGATTTCCTAATTGGTTTGGACACAATTACTTGTC CAATATAGGCTCATTAAGTTTATTCAACTGCAAGTTCTGTTTTTTCTTGCCACCACTTGGTATTTTGCCCTCTCTAAAGACACTGTGGATCGTAGAACTT GAAGGGATAGAGACTATTGGTCCTGAGTTCTATGGGAATAACTCCTTTGCTGCTCCATTTGGATCTCTCCAATACTTACACTTTCAGAGAATGAACGCAT GGGAGGAATGGGATTGTCAAAATGAATTAGGAGCTTTCCCATGTCTTAAAGAGCTTCATATGTTAGAATGTCCGCAACTCAAAACTCAGTTACCTGGACA TCTTCCTTCTTTGTTGACACTAATTATTAGAAACTGCATGCAGCTTGTGGCTTCTCTTCCTTGTGCACCGACAATTCATGAATTACATTTACGTGATTGT GGAAATCTGCATTGGGAGTCTCTTGCACCCACTCTTAAAATTCTCTGGATTGGTGGCCGGTGCATTGAAAGATCCTTACTTGAGGAAACCATGCATACGA TGTCAAATACTTACCTTGAAACACTTGACTTTTGGGATTGTCCGAATGTGGAATTTCGCATATGCTATCCCCTTAACTTTCTTAGAAGATTTGATTTGCG AAGAAGCTTCAAAACCCTTAAAGCCTTCCCACTGGATCTCTTCCCAAAGCTTCAGAGACTGTTTTTGGAAGATTGTAGTAACCTTGAAAGGTTGTCCTTC TCTGACAAGCTTGATCGAAGGGTTACATCTCTTATAGAGTTGATAATAGAAAAGTGTCCTAAATTGGCATCATTTCCTGAAGGTATGCATACCCTCTTTC CATCTTTAAGACTAATAAGTTTATCTCATTGTCCCCAGCTGGAATTGCCTGAGGGTGGTTTTCCGTCAAGCCTGGGGACACTTGAGATATCGAATTGTCC TAAACTGATTGCCTCTCAAATGAGATGGAATTTACATAGTTGTACTTCTTTAAGTCAATTGCATATTAAAGATGAAAATTGTAATAAGGTTGATTACAAA GGGTTACTGCCTCCAATTCTTAAGAAGTTCGATGACAACAGTCCTCGGCTTTTCTCCTCTTCGAATTATGGATATTGTCCAGTGCTTCGCTTCGACAGAG CCTAGAAGAAGATCTTTGTTCCTGACCTTGGCACGGTTTTGATGAAGACACCAACATCACCAAAAAGAAGAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_183717; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516963
Blastp | Putative disease resistance RPP13-like protein 1 from Arabidopsis with 36.61% of identity |
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Blastx | Putative disease resistance RPP13-like protein 1 from Arabidopsis with 36.37% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT3G14470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454844.1) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |