Ll_transcript_518528

• Id Trinity: TRINITY_DN51280_c2_g1_i6
• Name Transcript: Ll_transcript_518528
• Sequence: TGCTTATAAGCTTACGTCTAGTAATGTCACTATTTGTTTATGTCATTTTCAATTAGAATAACTTTATGATGGATGATAGTGCATCTTTGATATCATCTCA TGACTCATCCATATGGTATTCTCCTTTACTTATCCTACATCTGTTAACTCATGAGCCCTTATAGCCCCTGGAAAAAAAGTTGAAAAGAAAAATGCTCGGT TTTTAAGAAACCAAAAAGAAATAATGAGATGATCTCCAAACTTAGCTATAATTCTGTTATCCCTCATTCCCTCCTTTAGTTGATAACATTCATCAGTGGA AACTCTTGGAATTATATTCAATGAAGAATTCATTACAATGTGATATTTACAAGACTAAATAAATAGAAGAAAGGAAGTTCCTAGAATATTAAGGTCCCAA TACTTCTTTGAACTAGAAACTAATTTGTTGCTATGTAAATTCCAACTCATTAGCAACCTGCTAACACCTCCTCAAATTAATGCGCTTGGTCAAGAATCAA TTAGACTATGAGAAATTTATGATGATGCCGAGATATGGCCTTGGTAAACACATCAACCAGTTGTAGATCCGTGGTGACACTGGAAGCAAGATAGCATGAT TATCAAATGCTTCACAAATGGAATGATAGTCCACCTCAATATGCTTGGCGCACTCATGAAAGACCAGATTAGCAGTAATCTAGATAACACTTGTTTTATT TGCAAAGAGGGGAGCGGGATGAAGAAGTCCAAGCTTAGCTAACAAACCGTGCAGCCAAGTGATCTAATATCAAGATAGATACATACACGATATTCAGACT CAGTTGAAGACTTGGATACTGGAGCTTGCTTCTCACTCTTCCAAGAAATGAGGACGTTATCATGAAACATACGGCAACCTGTAACAAATTGCCAAGTGCC CATGCAGCCAGCCTAACCTCACTATAAGTAATCAACCGAAGGGAAGACTCAATAGAAAAAACATAAACCATGGCTGGCAAAACCTTTCAAGTAGCAAATG ATATGCAAACAACATCCAGATGAAGATGTCAAAGGAGTGTGCATAAACTGAATCATGTGTTGAATGGCAATAAAATGTTAGGTAGTGTGATGGTCACATA ATTAAGGCTCCTGGCCAATGGATGACACAGCAATGGATTGAGAAGGGGCTCACCTTCCTCACGACGGTATTCGTGTTTACCTCGAGGAGTGTGTAAACAG AAGAAGCAGATTGAAAGCCAACCAAAGAGACCAAGTCCCGGCATATTTTTTTTTATGTTAAAAAAGTACAGTGGATCGTATCATACTCCAAGGTGCAAAA ATAGTGGAGGGAACTAAGATCCGTCATGTGAAACATGGCTTGAAGCAGTTGGCTTACTTTTAGAAGTTTACATGCAGAACAGCCAAAAGATAAGGGATAG GAAGAAGAATGTTTTTTACTACCAAAAAATCCATGTTTAATAGCTAGATTAAACAAGGGAGTTCCGTAACCCAAACATTCATGCCATATTGCACTTCGAT TTTCTAGAGGTAGAAGCGAAATAGAAAAACTCTAGGAGTAGTCAAGTGTAGAGGAAACAATCTGTTTACTTCAGCTCCATTTGTGTTCCCTTCCCCAACT CATAATCCTGCACAAGACAACCACCACGAGAAAAATGAATGTCACAATTGTTATCTACCACTCGACCAACTGAAATTAAACTAGAAGAAAGTCCCCGGGG CACTAGCACATAATGAAAAGGGGAATCAATATCCCGAACTGCAGCATTAGGGAGAGTTCTAGCATTCAATTTGATTATGTTCTGTACCAGAATAGGGTAA AACATTATTAAGAAATCGGATGTACCGGTCATACGATTCGAAGCCCCAGAATTAACAAAACTAAGGCTTGAGAGAATTTTTAGTCTTACCTTGAATGGCC AAGACTATCCTTGGACTTGGCTTTTATTGAGAACATGCTGACAAGAAAAATGAGCACAAGGAAGCAATTTCATTGTCATCTTTCAATTTGCAAAGATTCT TAGGCTGAAACAAAAAATTTAGGCAATTTCCATCTTTTCCATAATGCCCATGCTATCTTTTTTCTCTTACTAATATAAACCGCTGCACTTTCATACGCAT GATCCCCTTGGTGATGTCATACCATATAGAAATGGTGGCTGGGTTCTAGTTGAACATGGACTGTTTTTATTGTTCTCTTCAAAATAAGTGTTTCTAGAAA AATAATCTTAGTTTATTGCTTTGGACAAAGCTTTATTTTGTCATGAAGCCGCCAACTTTGACCTGAAATCTGAAAAAAAAACTCCTGTTTACAGTACCCA CCATCTTTGGCAGAGCGCGAGTCGTTGAACACTACCGATGGTTCGTCTGCTTCACTCACTGCTGGATTGCTCGTAGGTTTGGACATAGAATCCTCCACAC CAGATACATATCAGTCCCCTCCTGTACCTCTGCCTTATGATACAGTCCTTGGAGTTCCAGCATCAACGTACTCTGAAGCAGGCAGAGAAACACCTAGCGG TACTAGTTTTGAAACTTCGGTGAGATGTGAAGATCTTGTAGAATCAGAATGCAAAGCTCAAGCTGATTCCGAACCCATGTCTCCAAAGAAACCAGAACTG TCAAAATCAAATGAATCTCATGCATTAGCGACAGAAGAAGAGGATGTCTGTCCAATCTGCCTTGAAGAATATGATGTTGAGAATCCTAAAAATCTGACAA ACTGTGATCATCAGTTTCATCTCTCTTGCATTCTTGAGTGGATGGAAAGAAGTGATTCCTGTCCTATATGTGATCAGGATATGATATTTGACGAAATGAC ACTGAACTAGATTGATTCTCTTGAAATGAAGCTTGCTAAATATCTGTGTGGAAGATAGATGAAACCGGTTGGATGATGGTACAGATTTCATTTTCGAATC GCCGTGCTTTTAAAAAGTCGTTGTTCTAGTAGGTACATTCATTAGGGGAATAGAATTGTTAGAAGAAGAATGAGGAGGTTTTAACTGAATGCTACAACCA CATTGCTGAAGAAAGATGATGGAATTCATGTTCAAAAATAGCTTTTTACTTGTGTTGATTTCTTGTTCTCATTTCTTGTACAAAATTTTCAATGTTTATT TTATTTCAATGATATTTCGTTTGTTTGAAAGAAAAAGAAAAAAAATTATATTGGTGTAGTAATTTGTAAATGAAGTTTGTTTTACATTTCCAATGTATAT ATATCCTGGTGGATGTTGGGGATTACTCCATATTTTTTTGTTTTAAGTGCAATTAGATTGATCATACACTAATACTGTTTTTATATTAGATAACTGTTCT GGTTGGTAATAAAAGGGGTAATTGTAAACATTGCAGTAGATGCTATTGATTTGTTGTTTGGAGATAATGTTAATTTGTTTCTATTCTCTTTTTGGTTTTT GAAAGTTGGGAAAAGAGAATAATAAATTACAGG
• Tissue: pods
• Gene name: LI_gene_183732;
• Additional information: -

Expression of Ll_transcript_518528

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.6
• PS2: 0.1
• PS3: 0.1
• PW1: 0.4
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_518528

• Blastp: -
• Blastx: Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 51.81% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT4G00335)
• CantataDB: Link to cantataDB annotations (CNT0000117)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462195.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;