Ll_transcript_518807

Id TrinityTRINITY_DN51285_c1_g1_i21
Name TranscriptLl_transcript_518807
SequenceAATATTTAAAAAAATCACTTACAAAAATATTTGACTTGACCCAAATTTAAGATATTAGGAAGAAATCATATTGAGTTTTCCAAAATTGGGAAGAAAATTA TACAGATTTTGAGGAAGAAAATGAGTTTGATGTTATGTTGTTCCCAAATTCCTTTCTTCAGTTTCATTCTCACACACCCTAACTCATCTCCTTCCTCTTC TTATTCCTTCTGTTTCATAGCTATCTTGTCACTCATCTTCCCTATCCCTATCCCTATCCCTATTCCTATTCCTATTCCTATTTTCTCACCTCTCATTAGC TGCACCGTTTCTTAGTTCAAACGCCAACACAAACCTTCATGAACAACAATCTCATCGCTTTTGAATAAGATGTTATGTACATGCCGACACATCCATAGTT GAATAATGGCTGTTGAGGCTTCTGATACACAACACATGTTAGATGGTTTATATGATGATGATGACGACGATGGGCCAGTAACTTTCAAAAGGAGCACAAC ATCTAAGGTAAATCAGACGTGTTCGGAAGTAAGGAAGTCAACTTCTCGTAACCATGATGGACAGTCATATAGACAGACTTCTGATGTACGTACTTCAAAT GGCCAAGGTTCTGGCTTACAGAAGGGTAGGCGTGTCTCATCCGGTATGGTATCACCTACAAAATCTTCTAAAGCGCCTACTTCAATTGCCCAAGGTTCTA GTTTACCCAAGGATAAGATTGTACCATCTGGTATGGTGTCACCAAAGAAATCTTCTCAAGGCATCTCAAGAGCATCAAGTTCACACGTCAATGCCTATCC TGTGAAGTCACCTATAGAAAATACAAAATCACCTTCTTTAGGTGATAAACCAAAGCCTTCTCCGGAATGGAAAACTCCAAGTGATGTTAAGGAGGAAAAT AATTGTACCAGGCACCTTACTGGAGACAATTGTGAAGACTCTGAGGATGAGGATAATAGAGCATTAAGTGTTAGGTTGAAGACGAACTCTAACAATGCTA ACAGAGAAGCCGTTGCTGTTCTTAAGAAATCTTCTGAAGACTTCGATGACGATGAAGATGATATCCCTTTGTCAGCAAGGTTGAAGAATTCTAATTTGGG ACCATCTAGTAGCAAGTATGATGATGCTGATCCGAAGAAACCAATTTCAAAAGTGCAGAAAGGACTAAAAGTTGGTTCCAGTGCTAGTATCAAACAGGAA AGGCCATCTACATTGTCAGTTAAGAGGCCACTGGATAACAAAGCTTCCTTGCACTCGTCAATTAAGAAGCCAAAACTCTCAAATCCAGATGCATTAAGCA GTGCTAAGCAAGTACCAATGAAACCTGAGTCAAAGGTAGAGGATGATGATGATGTTCCTATTTCCCAAAGAATGAAGTTGTCCACATCATCTGATAAATC ATCTTCCTTGAAGAAGTCGAAAAATGTCACTAACGTTAATAAGGCTGGTTCGTCTTTTAAGAAACAGGCCAAGACGTTCAAAAAATCTTCCAATAACTCA GAATATTCCAAATCTACTAAACTTCTTCCTAGCTCTGGTGATGGTCAGAAAAAATGGACTACTTTAGTTCACAATGGTGTCATTTTCCCACCTCCGTATC AGCCCCATGGGGTAAATATGCTCTATAAGGGGAAACCAGTGGTTTTGACTCCTGAGCAAGAGGAGGTTGCTACAATGTTTGCAGTCATGCGAGATACAGA TTACATGCAGAAAGATAAGTTCAAGGAAAATTTTTGGACCGACTGGCGCAAGTTGCTAGGAAAAAATCACGTTATCCAGAATTTGAATGATTGTGACTTT ACTCCAATCTATGATTGGTGCCAAAGTGAAAAGGAGAAGAAGAGACAGATGAGTTCGGAAGAGAAGAAGGCTCAGAAGGAGGAGAGAGCTAAACTAGAAG AGAAATACATGTGGGCTATTGTTGATGGTGTAAAAGAGAAGGTTGGAAACTTTAGAGTTGAACCACCAGGGTTGTTCCGAGGCCGTGGAGAGCATCCCAA GATGGGAAAGTTGAAACGACGCATTTGTCCAAGGGATATCGTCATTAATATTGGAAAGGATGCCCCAGTTCCTGAATGTCCTATTCCTGGTGAAAGATGG AAGGAGATAAGACATGACAATACAGTTACATGGTTAGCGTACTGGAGTGACCCTATCAATCCAAAGTTATTCAAATATGTGTTTCTGGCAGCTAGTAGTT CCTTGAAGGGACAAAGCGACAAGGAAAAGTACGAGAAAGCTAGGATGTTGAAGGATTATATAGAGAACATTAGGGCTGCATACACAAAAGATTTTACAAA TAAAGATATCACAAAGCAGCAGATAGCTGTTGCTACGTATCTTATTGATAAACTAGCTCTGAGGGCTGGCAATGAGAAGGATGATGATGAAGCTGATACT GTTGGTTGTTGCACATTAAAAGTAGAAAATGTAACAAGAGAAGCCCCCAACAAGTTGAAGTTCAACTTCCTTGGTAAAGATTCAATCAAGTATGAAAATA CAGTTGAGGTCGAGCTTCCTGTTTATAATGCAATTTTAAAGTTCCAAAAAGAAAAAGGCCCTGGCGATGATCTTTTTGACATGCTGGATACAAGTAAATT AAATGCCCATCTGAAGGAACTCATGCCCGGACTAACAGCAAAAGTCTTCCGTACATTTAATGCATCTATCACATTGGATGACATGCTGAATAAGGGAACT AAAGGTGGAGATGTTGGAGAAAAGATTGTTGTTTATCAGCATGCAAACAAACAGGTTGCAATCATTTGTAATCATCAACGTAGTGTTTCAAAATCTCACA GTGCACAAATGTCGAAGTTAAATGAAAAGATTGATGAACTTAAGGCTGTTCTAAAGGAGCTGAAAACAGATTTGGACAGGGCAAAGAAGGGAAAGTCCCC TTTAAAGAGTTCAGATGGAAAGACAAAACGGAACTTAAATCCTGAAGCACTAGAGAAAAAGATATCTCAAACCAATGCAAAAATCGAGAAAATGCAGCGT GATATGATGACTAAAGAAGACCTAAAAACTGTGGCATTAGGCACGTCCAAGATAAACTACCTTGACCCCAGGATTACAGTTGCTTGGTGCAAGCGGCATG AGGTCCCTATTGAAAAGATCTTCAACAAGTCACTGCTGGAAAAATTTAGTTGGGCAATGGATGTGGATCCTGACTTCAGATTCTGAGATCTATGGAATGA AGGCTTGAAAACGTTTCCTTTTTACTCATTTCTTTTCTATAAAAAAAATATTTCTGTTATGTCAAATTAAGAGAAAATTGATGTTGTAATTTCATCTAAT CTATTTATGGGGTTGACCCTTTTCTCCATTGACCAGTTTTCTGTTTTTGAACAACCAACGATTCATGGATATGATTTCAAAATATTACCCATTGCAAAAT GAGTTTAAGTTTTGTAAAAAAAA BLAST
Tissuepods
Gene nameLI_gene_183766; 
Additional informationdetails; 

Expression of Ll_transcript_518807

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_518807
BlastpDNA topoisomerase 1 alpha from Arabidopsis with 60.92% of identity
BlastxDNA topoisomerase 1 beta from Arabidopsis with 62.37% of identity
EggnogDna topoisomerase(COG3569)
KeggLink to kegg annotations (AT5G55300)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431101.1)
PfamEukaryotic DNA topoisomerase I, DNA binding fragment (PF02919.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;