Ll_transcript_518783

Id TrinityTRINITY_DN51285_c1_g1_i4
Name TranscriptLl_transcript_518783
SequenceTATTTTTGATGATTTTGGCATCGTTCCCAATTTGGACGAGTTAAAACAACACAACTCACCCTAACTCGCTTCATTCCATTCCCTTTCTCTCTATTTTCTC TCTTTCTTTCAACTACTTCACCCTCTCCTCATTCATCACTCAGCTACATCTTCTTACACCTTCTCATTCTCATTCACACTTTTTTCGATTTTTGCATGTG ATGTACATACCAACACTTTCATAGTTGGATAATGGCTGTCGAGACTAATGATAAAACGAGTTTGCCACTTGATTTTGGTGATGACGATGGGCCAGTAACT TTTAAACGATATACATCATCCAAGAAAAAACAGTTGCAATCCGAATTGACGAAGTCGACTTCTAATAGTCTTGACGGACAGTCAAATAGACAGAGTTCAA ATGTGCCTTCTTCAAATGGCCAATCTTCTAGCACCCCAAAGGGTGATGTTGTCCCATCTGCTAAGGCATCAGCCGTGAAATCTCCTGTAGGAAACTCTAA AGCATCTAATTCACTTGTCAATCCTGCATCTGTTAAGTTGCCTGTAGCAAATTCAAGATCACATTCACTAAATGATAAACCAAAGTCTGTTCCGGAACAA AAGGCGTCCATTGATATTAAGGAGGAATCAAAATTTATCAAACATTGTACTAAGGATTATGCTGAAGATTCAGAAGATGAGGAGGATAATAAACCATTAA GTGCTAGGTTGAAGGTGAACTCTAACATCGACAACAAAGCAACCCCGGTTGTTGTTAAGAAATCTTATGAAGACTCTGATGATGACGATGATATCCCTTT GTCAGCAAAGTTATTCCGGAATTCTAACGTCGGAACATCCAGTGGTAACTATGATGACCCTGATGAGAAGAAGCCTATTTCAAAAGTTCAGAAAGAGCGG CAAAATGGTTCCAGTGCTAGCAATAAACAGGGAAAGCCGTCTACAGTGCCAGCTAAGAGACCACTAGATAAAAGTAATTCTGTGCACTCTCCAGTTAAGA AGTCCAAGGTCTCAGATCCAGCTGCATCAATCAAAACTAAACAAGTCTCTTTGAAATGTGAGCCGAAGGTGGATGATGACGATGATGATGATATTCCTAT TTCCCAGAGAATAAAGAAGTCGGCTACTTCAGCTGATAAATCATCTTCCATAAATAAGAAGGCGGCTACATCAGCTGATAAATCATCTTCGATAAAGAAG AATTTGGCAAAGGTTACTAAAGTTAACAAGGCTGGTAAAACATCTTTTAAGAAACAGCCAAAGAAGTTAAAAAAATCAGGCAAGGGTTCAGATTATTCCA AATCTATGAAATTTCTTCCTGGTTCTGGCGATGGACAGAAAAAGTGGACTACTTTGGTTCACAATGGTGTCATTTTTCCTCCTCTTTACCAGCCCCATGG GGTAAAGATGCTCTATAAGGGGAAACCGGTTGATTTGACTCCTGATCAAGAGGAGGTTGCTACAATGTATGCAGTCATGCGAGATACAGATTACATGCAG AAAGATAAGTTCAAAGAGAATTTCTGGAATGACTGGCGTAAGTTGCTAGGGAGAAATCATGTAATTCACAACTTGAAAGATTGTGACTTCACTCCAATCT ATGATTGGCACCAAAGTGAAAAGGAAAAGAAGAAACAAATTACTACAGAAGAGAAGAAGGCCCTGAAGGAGGAGAAAATGAAACAGGAGGAGAAATTCAT GTGGGCTATTGTTGACGGTGTTAAAGAGAAGGTTGGAAATTTTAGAGTTGAACCACCAGGATTGTTCCGAGGCCGTGGAGAGCATCCTAAGATGGGAAAA CTGAAAAAACGCATCTGTCCAAATGATATCACAATCAACATTGGAAAGGATGCACCAATTCCTAACTGTCCTATTCCTGGAGAAAGTTGGAAGGATATAA GACATGACAACACAGTTACTTGGTTAGCCTTCTGGAGTGACCCAATCAATCCAAAATTATTCAAATATGTGTTTCTGGCAGCTAGTAGTTCATTGAAGGG GCAAAGTGACAAGGAAAAGTATGAGAAAGCTAGGATGTTGAAGGGTTATATAGGGAACATTCGGGCTGCATACACAAAAGATTTTACTTGCAAAGATATT ACTAAGCAGCAAATAGCTGTTGCTACTTATCTTATTGATAAACTAGCTCTAAGGGCTGGCAACGAGAAGGATGATGATGAAGCTGATACAGTTGGTTGTT GCACATTAAAAGTAGAGAATGTGACACCAGAAGCCCCAAACAAGCTTCAGTTAAGCTTCCTTGGTAAAGATTCAATCAAGTATGAAAATACAGTTGAGGT GGAACTTCCTGTTTATAATGCAATTTTAAAGTTCCAAAAAGATAAACAACCTGGTGATGATCTTTTCGACATGCTGGACACAAGTAAATTAAATGCTCAT CTGAAGGAACTCATGCCCGGCCTTACAGCAAAAGTCTTCCGTACATTCAATGCATCTATCACATTGGATGATATGGTAAATAAGTCCTTTGACATGAGAA ACCTGGAATTTATGTTGTTTCAAAAAAAGGACGAAAACAATAAAATGAATCATGGTTCTATTATCTGCTACACTTTCCTTGTACTCAGTCTATTCTTGTT ACTTTATGTGACTTCGAAGATGATTACCCCCTTCTTCCAAAAAAACATTTAAAAAATCGATACTATTGATGTTGAAAACTTCAACCACATTAATCATAAA ATTGAAGTTCTACCTTGTACACTTCTTCCTTACAAAAATCTGCACCCAGACCTTTATTTGGATTTTTATGATGTTTTATTAAAAAAAAATTGATTTGCAT AATGTTTTACCATAATTACTATTATTTTGCCTTTTATTTTGGACTTGCATATTTATTTTTCCTGGAGTTATGTGAAAACAGTTGAATAAGGATACTAAAG ATGGAGATGTTGCGGAAAAGATTGTTGTTTATAATCATGCAAACAAACAGGTTGCAATCATTTGTAATCATCAACGTAGTGTTTCAAAATCTCACTCTGC ACAAATGTCGAAATTGACTGAGAAGATCGATGAACTTCAGGCTGTTTTGAAGGAGCTAAAAGTTGATTTGGACAGAGCAAGGAAAGGAAAGCCCCCTCTA AAGAGTTCAGATGGAAAGGCAAAAAGGAACTTAACTCCCGAAGCGTAATGCAATTTCCATGATATCTTCACACATTATAATATTAAATGTGATGCATGAT CTTGATTTATGTAATTCGCAGGTTAGAGAAAAAGGTAGCTCAAACCAATACAAAAATTGAGAAAATGCAACGAGACATGATGACAAAAGAAGATCTAAAA ACTGTGGCATTAGGCACGTCGAAGATAAACTACCTCGACCCCAGAATCACAGTGGCTTGGTGCAAGCGGCACGAGGTTCCTATTGAAAAGATTTTCAACA AATCTCTTTTGGCAAAATTTGCTTGGGCAATGGATGTAGATCCAGATTTCAGATTCTGAGATCTCTGAGATGGAGGAATGCTGCTATGTGGAAAACATTC CCTTTTTATTCATTTCTTATCCATAGAATAAATTTTTCTGTCTCCATCGAATTTAGCGGAAATTTGTGCTTTAAGTTCATCTAATCTAATTATGGGGTGA GTTGTCCCTTTAGAATGAAATTATATTTTTGTTATTGAAAACAAATAGATAAATATGCACTTGCTATTTTATTAATCAAGAAGATCTTGTTATGTGCAAA ATGAGTCACTTTTGTAGTTTGACTAAAAA BLAST
Tissuepods
Gene nameLI_gene_183766; 
Additional informationdetails; 

Expression of Ll_transcript_518783

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_518783
BlastpDNA topoisomerase 1 alpha from Arabidopsis with 59.81% of identity
BlastxDNA topoisomerase 1 beta from Arabidopsis with 78.5% of identity
EggnogDna topoisomerase(COG3569)
KeggLink to kegg annotations (AT5G55300)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019413101.1)
PfamEukaryotic DNA topoisomerase I, DNA binding fragment (PF02919.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;