Ll_transcript_518999

• Id Trinity: TRINITY_DN51287_c0_g2_i4
• Name Transcript: Ll_transcript_518999
• Sequence: CCCCTCGTGAATGCAATTTCTGTTCCAACGACACGTATATGTTTACCTTATTGGGGTTTTTGCTTTGCATTTCATCACTCTCAACCTTAATTCCTCTAAC CAAAAGCAAAGTTGAGACCATTAAGCTTAATTCATTTCTCATCATCTTATTGGTACCTTAATGTCTTCTTATACAAATCCTAATTGTTTATACTTTGTCA AATTCTCTCTTATCTCCATGCACAAAGTTGAGACCACTTAAGCAGCAGAGTTTTTAGTTTAAGAAAAAGATCTTGTTCTTCGAAATCACTTTACCTTTGG TGGCAGTAGTGGTGAGAAGGATTGTAAGGGTTTACATAGTCTAAGTGATTATAAAGCTAAGTGCTTTTATGTGAAATCCAATGACCCATGTGTCTCTCAG GGCTATGTTGACTACCTATACCTTTACTATTGCAAATTTGGGGATTTCCCTCTACTGGGTCACACCCTTTTGTTTCTTGGGCTCCTAGTTTTGTTCTATC TTTTAGCAAATACAGCTTCAGAATACTTTTGTCCTTCCCTTGAAAACTTGTCCAATTTGCTGAGGTTGTCTCCTACAATTGCTGGGGTGACCCTTCTCTC TCTTGGCAATGGTGCCAGTGATGTTTTTGCCACCCTTGTCTCTTTCAATGGTAGTGGGACACATGGAATTGGCTTTAACACTGTGCTAGGGGGTGCATCC TTTGTGACCTGTGTTGTGGTTGGAATTGTGAGCATATCAATTCGCGGTAGGGGAATTCGCATCAAGAAGTCTGCATTGATAAGGGATGTTTGTTTCTTAC TTTTGGTTCTGCTGTGCTTGTTCACCATTTTGGTGAGTGGTGAGATCAATGTTCTTGCAGCAATTGGTTTTTGTTTGATATATGTGGTGTATGTGGTTGT TGTTTATGTCTCGTCCACGCGGTGGAAGGGTGTCTGTGTTGATGCTGAAAATGATGGTGATTCAAGTCATGGCAGTGATTTAGGTGTGCCTCTTCTCAGT GGGATGGAGAAAGGACTAATTGGTAGTGCTGAAAATGAAGCTCAAGAATGCGACACGAAAGTTCAGAAGACATGCTGCTCTAAGAAATCTTCAGTATATG GAACATTACTTCATGTCTTGGAGATGCCACTCTACTTACCTAGAAGATTGACAATTCCTGTTGTTTGTGAAGATCGTTGGTCGAAGCTGTATGCAGTTTG TTCATCTATGCTAGCACCAATTCTCTTGTCTTCACTATGTACCTCAAACAAGGATCACATTTTCTCCATCTCAAACCTTATAATTTATGGAATTGGCTTC TTGGTTGGAACTATATTAAGTATAGTTGCATTTTTCGCGACTGAGATGTCAAGTCCGCCAAAGAAGTACTTGCTCCCTTGGCTCGTTGGGGGATTCGCAA TGAGTGTGTGTTGGAGCTACATTTCGGCTAAGGAATTGGTTGCATTGTTGGTTTCACTTGGTTACATATGTGGTGTAAGTCCTTCAATATTGGGGTTAAC AGTTCTTGCATGGGGAAATTCACTTGGGGACCTAATCACAAATTTAACAATGGCCTTACATGGTGGACAAAAAGGTGCTCAAATTGCAATATCAGGTTGT TATGCTGGCCCTATCTTCAATACAGTTATCGGATTAGGCTTATCTCTTGTGTTCTCTACTTGGTCACAGTATCCATCATCTGTTATGATACCTAGAGATC CATATTTGTGGGAGACATTAGCACTTTTGGTGGCTGGGTTGGTTTGGGCACTTGTGGTATTAATAAGAAGAGATATGAAACTTGATGCAGTCTTAGGAGG AGGGCTTTTAGTTGTTTACTTCATTTCTTTGTTTCTGAGGCTGATTCAGACTCTTGGTTCTCTTCAATTTCAGGATATGTTAACCTTAGTCTTGAAAAGA TGATAAGTTGTGAAAATTACACTGATAATGGGGTTTTGTTAGATGTAATACTCCCACTGCTACTTACATTATAGAGATTAGACAGTTTTCTGTAATCATT AACTGCCTAACATAACTTTCTCCGGCTTAGAACCAATTATGACTATGTTTTTTGGTTAATACCATTTCTACAAACAGACAAATTTAGGACTGGGAAAT
• Tissue: pods
• Gene name: LI_gene_183782;
• Additional information: details;

Expression of Ll_transcript_518999

FPKM

• PAB: 5.2
• PNAB: 1.6
• PS1: 2.4
• PS2: 3.3
• PS3: 2.7
• PW1: 1.1
• PW2: 1.8
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_518999

• Blastp: Cation/calcium exchanger 1 from Arabidopsis with 53.76% of identity
• Blastx: Cation/calcium exchanger 2 from Arabidopsis with 55.64% of identity
• Eggnog: exchanger(COG0530)
• Kegg: Link to kegg annotations (AT5G17860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437482.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;