Ll_transcript_519148

• Id Trinity: TRINITY_DN51294_c3_g1_i4
• Name Transcript: Ll_transcript_519148
• Sequence: CATATTACCATGACACTACACTGCTTCAATTTCCCTTTTTTTAAATAAATAAATAAAAACTTCGAATCCTTTTTACACAATAACGAAAATGATTAAAAAA ATCACGACGAAGCGTGTACCTTAAAGCACGATGGATATTTATCGATGAAGGAGAAGAGAACAAAAATGGATTTGAAGATTTGGTAGTGAAGCTTTTGGAA CGATTAGCGAGGGTCCTCGATGCTACCCTCGCTATTGATTTACACACCGTAGAAGAAGCCATTGTTCTAACTCACATTTCCTTCAACCCCTTAAACCCTA ACATTTCACAATTGGGCCTGGCCCATTTCAAAAACCCAAAATAAACCGGTTTATAAATCCGACCCGGTTTATAACGAACTGAGACGAGTGAAGTGAAAAA CCTACTGCATCGTTGAGCAGTGGCGAAAGAGAAAAGGGGAAAATGGCAGAAGAAGCAATTCTAGGTTATTTGGAACACAACGATGAGATTAAAGATTCAG GAGAATTCGCAGGTGAACGTAACATCGATCATAGTGAGATCGTGAATGTGATAAAGAGTCTCTATGGTTTTCGATACGTGGATGTTGAGGATATTAAAAG GGAATCATGGGTTTTAACCGATGAGGGGAATATATATGCTGAATCAGGGTCACCAGAAGTGCAATTGTTTTTGGCGGTACCAGAAGAGGGTATTGTGAAA GATGAACTTTTGAAGAAAGTGGGTCCTTCTCTCTTCAAGATTGGTTGTGCCCAAGCTGCTAAGAACAAATGGCTTGATTTGGGTAAACAACTTATCACTA GAAAGCTTCAACATGTTGATGACAAGGTTAAACACCTGCTTCTTCAAATACAACAAGGACAGGGCATTGGTTCAGATGATATCAAGGCACTCAAAGCACG AAAGCTTATTGTTCCACAGACGTGGAAGGGTTACTCGGTGAAAAAGGGTCCTAACTATGCACCAAAAAGAAAGCAGGTTGTCACTGATTTAACTCGGGAT AATTTTCAGAGTGGTGAGTGGAAGGAGTTAGAGTTCAAGGAATACAATTACACCGCTAAAGGTCAGCCTCTTGAGGGTGGTCATCTTCATCCACTGCTGA AGGTACGTTCTCAACTGAAACAAATTTTCCTCTGCATGGGATTTGAGGAGATGCCGACCAATAATTTCGTCGAGAGTAGCTTCTGGAACTTTGATGCCTT GTTCCAGCCCCAACAACACCCTGCTCGTGATTCGCATGACACATTCTTTTTGGAAACTCCTTCAACAACGAACAAACTACCAGAAGACTATGTTCAGAGG GTGAAGCAAGTTCACGAAAGTGGAGGTTATGGGTCTCGGGGATATGCATATGACTGGAAAAGAGAGGAAGCAAATAAAAACCTCCTGCGAACCCACACAA CTGCTGTTTCCTCCAGGATGCTTTACCAGCTGGCACAGAAACCTTTTACTCCAAAAAAATATTTCTCCATAGATCGAGTATTCAGAAATGAATCAGTTGA TCGAACTCATCTTGCTGAGTTCCACCAGATAGAAGGTCTTGTATGTGATCGAGGGCTCACTCTCTGTGACTTAATAGGAGTACTGCATGATTTCTTCTCA CGCATGGGCATGACCAAGCTGAAGTTCAAACCAGCATACAACCCTTACACTGAACCTAGCATGGAGATTTTCAGTTATCATGAAGGCTTTAAAAAATGGG TAGAGGTTGGAAACTCTGGCATGTTCAGACCTGAAATGTTGCAGCCAATGGGACTTCCTGAAGATGTCCAAGTTATTGCATGGGGTCTTTCCCTTGAAAG GTACGCGAAATTTGAGATCACCGTCATAATTGCTGATGCCTGAGAATGAAATGAATTAATCTGTTAAAACCAAAGTTCTAAATTATTGTGTTATGGTTAC AATTTTGCTATCCAATGACTTATACAATACATTCACATTCATGGAAATTGATTCTGACTTGTTCTTTTACCTGGAAACAGGCCAACTATGATACTATATG GGATAGATAACATCAGGGATCTCTTTGGACATAAGGTATTATTTTATACTTGCTAAACAAATAAACACCAAGTGTTATCTTCATGTTGAACTCAATAGCC ACACAATGGTGTCTTTATCCTTCAAATGTAAAATGCTTGATTCATTGGTTCTCATTTTCAATAATTAAATGTTATTTCTTAAATTGATGAAGTGATGCTA TATCCTAAGCCCTGCATTTGTCATTTTTTGTGCAGGTTGATCTTGGCCTTATGAAGAAAAATCCAATATGCCGTCTTGGAA
• Tissue: pods
• Gene name: LI_gene_183835;
• Additional information: details;

Expression of Ll_transcript_519148

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519148

• Blastp: Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 79.07% of identity
• Blastx: Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 79.07% of identity
• Eggnog: phenylalanyL-tRNA synthetase, alpha subunit(COG0016)
• Kegg: Link to kegg annotations (AT4G39280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448494.1)
• Pfam: tRNA synthetases class II core domain (F) (PF01409.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;