Ll_transcript_519156

• Id Trinity: TRINITY_DN51294_c3_g1_i9
• Name Transcript: Ll_transcript_519156
• Sequence: CATATTACCATGACACTACACTGCTTCAATTTCCCTTTTTTTAAATAAATAAATAAAAACTTCGAATCCTTTTTACACAATAACGAAAATGATTAAAAAA ATCACGACGAAGCGTGTACCTTAAAGCACGATGGATATTTATCGATGAAGGAGAAGAGAACAAAAATGGAGTTGATGATTCAGTAGTGAAGCTTCTTGAA TAATTTACAAGGGTCCTTGATGAAACCCTCATTACTGATTTACAAAGCGTGGAAGCCATTATTCCCTTCCACATTCCTTCAACCCCTTAAACCCTAAAAT TCATAATTGGGCCTGGCCCTAATAAAATAAATAATAAACCAGCCCGGTGAGTCAACCCGACCCGACCCGGTTGAGTATCCTATTGAGTGTGTGGTTCAGT GAAACCTAATGGTGGGTGTGGCGAAAGAGTAGAATTGAGTTGAACATGGCAGAAGAAGCAATTCTGGGTTACTTGGAACACAATGATGAGATTAAAGACT CAGGTGAATTTGCAGAAGAACGTGAGATTGAGCATAATGAGATAGTGAATGTGATAAAGAGTCTTCATGGTTTTAGATATGTGGATGCTGAAGATATTAA GAGAGAGTCATGGGTGTTAACCGATGAAGGGAAGACATATGCGGAAGCAGGATCACCAGAAGTGCAACTTTTTTTGGCAATACCAGAAGAGGGTATTCCG AAAGATGAGCTTCAGAAAAAGGTTGGTCCTTCACTTTTCAAGATTGCTTGTGCCCAGGCTGCTAAGAACAAATGGCTTGATATGGGAAAACAACGTATCT CTAGAAAGGTCCAACATGTTGATGACAAGGTCAAAGATTTGCTTCTTCAAATACGACAAGGACAGGTGATAGGTTCAGATGATATCAAGGCACTCAAAGC ACGGAAGCTTATTGTTCCACAGACATGGAAGGGTTACTCGGTGAAAAAGGGTCCTAACTATGCACCAAAAAGAAAGCAGGTTGTCACTGATTTAACTCGG GATAATTTTCAGAGTGGTGAGTGGAAGGAGTTAGAGTTCAAAGAGTACAATTACAGTGCTAAAGGTCAGCCTCTTGAGGGTGGTCATCTTCATCCACTTC TGAAGGTACGGTCTCAACTGAAGCAGATTTTCCTCTGCATGGGGTTTGAGGAGATGCCGACAAATAATTTCGTGGAGAGTAGCTTCTGGAATTTTGATGC CTTGTTCCAGCCCCAACAACACCCTGCTCGTGATTCCCATGACACTTTCTTTTTGGAAACTCCGTCAACAACGAACATTCTCCCAGAAGATTATGTTCAG AGGGTGAAGCAAGTGCACGAATCTGGTGGTTATGGATCTAGGGGATATGCATACGACTGGAAAAGAGAGGAAGCAAATAAAAACCTTCTGCGAACTCACA CAACTGCTGTTTCCTCCAGAATGCTTTACCAGCTAGCAAAGAAACCTTTTTCTCCAAAGAAATATTTCTCTATAGATCGTGTTTTCAGAAATGAAGCAGT TGATCGAACTCATCTTGCTGAGTTCCACCAGATAGAAGGCCTTGTGTGTGATCGAGGACTCACTCTCTGTGACTTAATCGGAGTATTGCATGATTTCTTC TCACGCATGGGCATGACCAAGTTGAAGTTCAAACCAGCATATAACCCTTACACTGAACCTAGCATGGAGATTTTCAGTTATCATGAAGGCTTTAAAAAAT GGGTAGAGGTGGGAAACTCTGGCATGTTCAGACCTGAAATGTTGCAGCCAATGGGTCTTCCTGAAGATGTTCAAGTTATTGCATGGGGTCTTTCCCTTGA AAGACCAACTATGATACTATATGGGATAGATAACATCAGAGATCTCTTTGGACACAAGGTGGATTTAGGACTTATGAAGAAAAATCCAATTTGTCGTCTT GGAATTGAATAAAGAATAATCTATTGGCTTTCTTTTGTTTTAAAAATTACTATATCATTATTTTTTTGGAATTCTGGAAGGTCAAATAATACTGTAGATT ATTTCAATTCTGTATGAAGAATTTTGATATGGAAGTTACCTTTTTATTGGAAGGATTATAAACCTGGAATAGTATTTTTCTTGTTTTGGAAAACAGTCAT GATTAAGAAAGTTGCCCCATTCCATTGCCCAAGAGTGTCATAAGTTGTGATTTTGTGACAATTCCTTCACACACAAAAATGTAGCTAAAGATGCTTGTTA GACAATGGCATTTTCATGAAACACTCAAAA
• Tissue: pods
• Gene name: LI_gene_183835;
• Additional information: details;

Expression of Ll_transcript_519156

FPKM

• PAB: 0.6
• PNAB: 16.1
• PS1: 13.8
• PS2: 12.9
• PS3: 12.3
• PW1: 14.8
• PW2: 9.7
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519156

• Blastp: Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 79.92% of identity
• Blastx: Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 79.92% of identity
• Eggnog: phenylalanyL-tRNA synthetase, alpha subunit(COG0016)
• Kegg: Link to kegg annotations (AT4G39280)
• CantataDB: Link to cantataDB annotations (CNT0000307)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413281.1)
• Pfam: tRNA synthetases class II core domain (F) (PF01409.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;