| Id Trinity | TRINITY_DN51297_c6_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_517571 |
| Sequence | CTTTATTCACTTTTTATTTAATTCAACAACTTGTGTTGCGTTCTCTTTTTTCTCTTCATTTTTCTTCTTTTCCTTTTCTCTTCACTTTCTTCCTCTTTCA TCTCACAATCCCATCATGTAACTACTTCTTCTTTCATTCATAGATCACACTCACCTCTATCCTTTTTATTTTTATTATTTTCTCCCTCCACTTTTCTAAT TTCTATTCTTAGCTATTTCAATTTCGACTCTGATTTCTTCGTTTTTATTTTAAATCTCACTCACCTCTTTGCAAATTAGCTTTAATTGAATTAATTAGAG GTAGTTATTGTGTTATATAGTAAGTTTTTTTGGTTGAATTCAATGAATTTTTGTAATTCTAGGTTGTGTCTGCCTAGTTCATAGTAACTCACTTGTTTGC ATTAGTTAAAATTGAAATTGAGGATGAGATCGTAAGAGTACATGAATGAATAGCAATGGGATAACATAATGATGCTACTGTGCTTTGGGAATTGGGGTTT TTATGGAATGACATGTTTTGTTGTTATTGATTCTTGATAGACAATAGCTTCGGTGTATCCTCCTTTTGCCTCGGAGCCGTTTTTCGGCTTATTAGAGTAA GACTGCATATATCTATCATCGCCAGACCCGGGTAGATGGAGTCTCGTACACTTGACAGCCCATTTTAGCAGTTTCTCGTTGTAGATTTTAAAGGGTATTT TTGGGTAGGAATGAAGAGGCTAGGTTTTTAAGGCAGTTATTTGTTGTATTTGGTAGCAGAGGAATGCCCATGTTTTTTTTCTTTCTTATGAATAAAAAAG ACTTACTATCTTGGGGATCTGATACTACTTGCTCTGCTCAAAACCCTAGGGAGTTACGTTATTACATAAGTTGATTTCTAATTTTTCTATCATGATATAA GTTAGTGGTTCTTATTGTATCTGTCCAAAACCTCACTGATGGATTTACACGGTGCTTCCTCTATCAATTAGGTCTTTTACCCATTGAAAAAGTATTTGAT CATATCTATTTCTTCAAATTTCAACTTCTATGAAGTTTCTTAAAATTGTTTAGGGTGATTTATATATATGTAGAAAGTCGTTTGTTAGTTTTTCTTAGCG GATTATTCCGAAGCTTTCATATATCACTTGTATGGGCATGCTCTATGTTATAAGTTAACTTCGATCATAGGAATGTTCTAATGTCCATATTTAGTTGACA GTTATTATTATTTTTGTTCTGTTTCATTCCCATCTTTCTGATGCTCTAATTTTCCATCTTTTAATGTAGTTATGTGAAGGGGGAAGAACTGGGTAAGGTG GTTCAATCAATATGGAATCCTGCAACTGTATTGAGCCACAATTTCCAGCTGAGGAATTATTGATGAAATATCAATATATCTCTGATTTCTTCATCGCCCT TGCTTATTTCTCAATCCCTCTGGAGCTTATTTACTTCGTTAAGAAATCAGCAGTATTTCCATATAGATGGGTCCTTGTTCAGTTTGGTGCTTTCATAGTT CTATGTGGAGCAACACATCTAATTAATTTATGGACCTTTACGATGCATACAAAAACTGTAGCAATAGTAATGACCATTTCTAAGGTTTTAACTGCTGTGG TATCATGTGCAACTGCCCTTATGCTTGTCCATATTATTCCTGATTTATTGAGTGTTAAAACTAGAGAACTATTTTTGAAGAAAAAAGCTGCAGAGCTTGA TAGAGAAATGGGCCTGATTCGCACACAGGAAGAAACTGGACGACATGTAAGGATGCTTACTCATGAGATTAGAAGCACTCTTGATAGACACACGATACTG AAAACAACTCTTGTTGAACTGGGTAGAACTTTGGCACTAGAGGAGTGTGCTTTATGGATGCCTACACGGACTGGATTGGAGCTTCAACTCTCTTACACAT TGCGGCAGCAAAACCCAGTGGGCTACACAGTACCCATACATCTTCCTGTGATCAATCAAGTATTTAGTAGCAACCGTGCGGTGCCAATTTCACCGAATTG TCCAGTTGCTAGATTACGTCCTCATGGTGGAAAATTCATGCCTGGGGAGGTAGTCGCTGTTCGGGTCCCTCTCCTACATCTTTCTAATTTCCAAATATAT GATTGGCCAGAAGTTTCAACAAGAAATTATGCTTTGATGGTCTTGATGCTTCCATCTGATAGTGCCAGACAATGGCATGTACATGAGTTAGAGTTGGTTG AGGTCGTTGCCGATCAGGTAGCTGTTGCTCTTTCACATGCTGCAATCTTAGAAGAGTCAATGAGGGCAAGAGATATGCTTATGGAACAGAATGTTGCACT TGATCTGGCTAGAAGAGAAGCGGAAACTGCAATTCGTGCTCGCAATGACTTCTTGGCTGTGATGAATCACGAGATGAGAACTCCCATGCATGCAATTATT GCACTCTCTTCATTGTTACAGGAAACGGAACTGACAGCTGAGCAACGTCTGATGGTGGAGACAATATTAAAAAGCAGCAATTTGTTGGCTACTCTCATCA ATGATGTTTTGGATCTTTCACGACTTGAAGATGGAAGTCTTCAACTTGAAGAAGCAACATTTAACCTTCATTCTCTGTTCAGAGAGGTCCTTAACTTGAT TAAGCCCATTGCATCTGTCAAAAAGTTGTCGCTCACCTTACAGATAGCTGCAGATCTGCCAGCATATGCCATTGGTGATGAAAAACGTCTCATGCAAACT CTTCTGAATGTTGTTGGTAATGCTGTGAAGTTCTCAAAAGAGGGCAGCATTTCCATCACTGCTTTTGTTGCAAAGCCTGAATCCTATTCCAGAATTCCCG ACTTTCATCCAGTGCCTAGTGATAGCCACTTTTATTTGCGAGTACAGGTAAAAGATTCGGGAGCAGGAATTAATCCACAAGATATCCCGAAGTTATTTAC TAAGTTTGCACAAAGCCAGACATTAGCAACTAGAAATCCTGCTGGTAGTGGACTTGGCCTTGCAATATGTAAAAGATTTGTAAATCTCATGGAAGGTGAA ATTTGGATTGAAAGTGAAGGTGCTGGCAAAGGATGTACAGCCACATTTATGGTAAAACTTGGAATACCAGACCAATCAAATGAATCTAAGCTACCTTTTG CTCCTAAAAACACGGGAAGTCATGTATCTACAAACTTTGCTGGGCTCAAGGTTCTTGTCATGGATGATAATGGGATTAGCAGGTCAGTAACAAAGGGTCT TCTAATGCATTTAGGATGTGCAGTCACAACCGTAAGCTCGAGCGAAGAGTGCTTGCGTGTTGTTTCTCTTGAACACAAAGTGATCTTCATGGATGTCTGT ACAGGGTTGGATGGTTATGAACTAGCAGTTCGTATTCACGAGAAGTTCACGAATCGTCTAGACAGGCCACTAATAGTAGCTCTTACCGGAAATACTAACA AGGTGACCAAAGAGAAGTGTATGAGGGTTGGTATGAATGGCCTGATATTGAAACCAGTTTCTGTTGAGAAAATGAGGGGTGTGTTATCCGAACTCCTAGA GCGCCGAGTTCTATTTGAAACCCTTTAATAAGCCGCACCACTGGCTTCATTTTCTTGTGTACATAGCCAAATTAAATTGGGAGAAATACAGAACTTAGGA AGCAATGATAAATCCAGGCAAAAGGAACAGTGGTTGAGTTTCCACTGATAAATCCATTTTTCTGAACAGATTTTGTTCCATACTCTGAATTTTTATGCCA TTTCAGACTCTTGAAGTCTTGATGTTTTACAGTGGAGGCAAAATTCAATATATGGTCCTAGATTGTTTCAAGCTATCAACAAGTTTTTTTCTTTTGTGAA ACCAGAAGTTAAGTGTTTCACTACTAATTAGCTCACATGTTTAACTTGTATAGTGCCAAGGCCTATTTAACATTTTCAACATGTTTTGCAGTGAGTTCAG TTTTTGCTGCACAAATGTACAGAGAGTTATTCCTAGCTAATTTTTAATGATTCACTAGTATTTATATTCCTTGTCACATTTTTTCTAGATGTTGACGTTT GGTGCTACTGTTCACTATTAGTCTCTGTTGTTTTTTAATGGAAATTATTGCAGATATTGTGGTAAATCAGCAATGTGAATTGTATTAAAGTTTATGCAAC AAGGACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183869; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_517571
| Blastp | Ethylene receptor from Malus with 86.5% of identity |
|---|---|
| Blastx | Ethylene receptor from Malus with 86.5% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (103401284) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453385.1) |
| Pfam | GAF domain (PF01590.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |