Ll_transcript_288714

• Id Trinity: TRINITY_DN51300_c1_g1_i17
• Name Transcript: Ll_transcript_288714
• Sequence: AAAAAACCTTTAAATACAGTTGAATCCTCAACAATCCCAAAAAACCAAACCATTGAAACTAAATTTCTATCTATCAATCATTCTCTACTACTTTTCACTT CTCTGAGGTCACGCACCAATCATCTTCATCACTCTTCTCTCAAAAGATTCCCCATTTTCTCAAAACACTGTGCTAAAGGATCAAGCTTTCGTGTCTCAGG ATCATTTCTCTCTTACCTTCAAGCTTTAGGGTTTTCTGATTTTTTGTACCCTTTTTAGAGAAGGGTGATGCAATGAAGCAGTCTCTTGATCCTTCATCTT TGGGTACTTCCATGTTTCGATCTATAAATATGCCTAAAGAAGCGGGGCCGGCTGCGTGGGGTGTTTTATCTGGATCCGATTCCTACTATGCCTCATCTGA TGCTAGCCTCTTTTCTAGCTCATTACCTGTTCTTCCACATGAAAAATTGAACTTAAGTGACATGAAAAACAGTTACCAATCATCTGGCTTTAAAAAGCTC CACCAAGATATTCCAGGCAATGATTCACCTGAAGATGTTGACACTAATGCAATTGGAAGTATGCTTCCCGATGACGAGGAGGAACTATTAGCTGGTATAA TGGATGATTTTGACCTAAGTGGTTTGCCTGGTTCCCTTGAGGACTTGGAAGAGTATGATCTTTTCGGTAGTGGCGGAGGCATGGAACTAGAAACTGACCC ACAAGAAAGTCTCAGTGTGGGTATGTCTAAGTTAAGCTTCTCTGATAGCACTACTGGCAATGGTTTGCCTCTTAATTCTTTTCCTAATGGTGTGGGAGCT GTTGCCGGAGAACATCCGTTGGGAGAGCATCCATCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTTGAGGATTCCGAGCTGAAAGCTCTTTTTG AGCAATATGGTGATATTAGAACCCTCTTTACTGCCCGTAAACAGCGGGGGTTTGTAATGATATCCTATTATGACATCCGCGCTGCTCGAACAGCCATGCG TGCATTACAAAACAAACCTCTTCGGCGCAGGAAACTTGACATTCACTTCTCAATACCAAAGGACAATCCATCAGACAAGGATATCAACCAAGGAACCTTG GTAGTTTTCAATTTAGATCCTTCGGTTTCAAATGAAGACCTCCGTCAAATATTTGGGGCTTATGGAGAGGTCAAAGAGATAAGGGAAACTCCTCACAAGA GGCATCATAAGTTTATTGAATTTTATGATGTCAGAGCCGCAGAAGCTGCACTTAAGTCATTGAATAGGAGTGACATAGCTGGTAAACGCATAAAGCTGGA GCCTAGTCGCCCTGGAGGAGCTCGTCGAAAGTGTGTATATTAATAATTTGACAATTGATATTGTTTTGATATTCTGTTTATCTCTGTGGTGAAAATCATT GTTCTGCATTGTGTGAATATGAAGAAACCGATGAGGCATCTAGAGACCTTTCTGCTGTTAAATAGAGTAGCACAAATGATAATCTCTGGCTTATCTTTCT CTGGTGCTTTGTGAGACAGATCAAACACTGTCGAAATTATTTGAAATTAATTAATATTGGGATTGCGTTCGAGTAAAACGGCTTTCACCAAATGCTCCAT AAAAATTTGTTATTCGAGAGTAGAAAAATGTTATATGGATATACCTCCCTCTGTTTTCTGGCACCATTATTTGATGCAAAAGTATATAATTGATAATACC TTGCACCTTGTAGTTTGATGCTCCAACTTAATCAAGATCTTGATCAAGATGAATCTCGGAGTTTCCGATATCAAGTGGGTTCTCCTGTGGCAAACTCTCC ACCAGGTAATTGGTTCCAGTTCAGCAGCCCTGTTGAGCAGAATTCAATGCAAACTATGAATAACTCTCCCGGTTCTAGGATCATAGGCCCTACAACAGGC AACCATTTTTCAGGATTAGCTTCAATTTTGCAACCTCAGGTATCAAACAATGTGAAGGGTGCAGCTATTGGCAAGGACTTAAGAACTAGTAGTCATGAAG AGCACATATTTACCAGTATGAATTCAACAAACGGTACGACTTTTCAGTCGCATTCACTTCCAGAGCCAAAGTTCAGCCAATACTGTGGACCTTTATCTTC TTTCGGTCAATCGACATCAAATGGATTGTCAATTGAGACCTTGTCTGGGCCACAGTTTTTATGGGGAAGTCCAACCCTCTACTCAGATCATAGCAAACCT TCAGCTTGGCCAAGACCATCCTTGGGGAATCCATTTACCTCAAATGGAAAGAGTCACGCCTTCCCATATTCGTCGCAGAATAATTCCTTCATTGGTTCAT CCCAGCATCATCATGTTGGCTCTGCTCCATCTGGTTTGCCTTTTGAGCGGCGGTTCGGTTTCCTTCCCGAGTCACCTGAAACTTCATTCACGAGTAATGT TGGTTATGGAGGCATGGGTCTAGGGAACAATGATGGAAATTACATGGTTAATATGGGTGGATCTATTAATGCTGGGATTAATATGTCAAGAAATGTCCCT GATATTGGTTCATCAAACTTCAGAATGAGATCTTCTCCTCGGCTTAACCCTGTGTTTTTGGGTACTGGTCCTTACCCCGGACCGCCACCTGCTACCTTCG AGAGTTTGACTGACCGTGCTCGTAGTAGATGGATAGATAACAACGGGAGTCAAGTTGATAGCAAGAAGCAATTTCAGCTTGACTTGGATAAGATTAAAAA TGGCGAAGATGCAAGGACTACATTGATGTTAAAGAATATCCCTAATAAATACACCTCGAAAATGTTATTAGCTGCCATCGATGAAAATCACAAGGGTACC TATGATTTTATCTATCTGCCGATTGACTTTAAGAATAAATGCAATGTGGGTTATGCGTTTATCAACATGCTGTCACCTTTGCTTATTATTCCATTCTATG AGACATTCAATGGGAAAAAATGGGAGAAGTTTAACAGTGAAAAAGTTGCTTCTTTGGCATATGCTCGAATCCAAGGAAAGACCGCCCTTGTAAGCCACTT CCAAAACTCAAGTTTGATGAATGAAGATAAGCGCTGCCGCCCTATTCTCTTTCACTCGGAGGGTCCTGAAGCTGGTGATCAGATCATACAAGAGCATCTT CCTTCCAATAATCTAAATGTTCAGGAACATAGGCCAAGTGAGTCACATTCGAACGATTTTCATGGAAATCCTCCAAATGATGGTTTTTCTGTGAGCTTGG AGACAAATTAACATTACATCAGATGCATAGTTGCATGAGTCCAATGTGGTTACTGTTAATGTGAACATTTGCATGTATGTCTTGGTTATATTTAGGAAGG ATGTAGATTTTGTATCATAGTTACATTCCTTAGAGTATTTTGCCAGAGAGCTTCAGAAGCTTGGAGCATTTTGGTTGATTTTCTTGCTGAACAAGTAGCT GAATCTGATTATATGTTCAAGGTGAGAGCAAAGGCTGAAGGATTGAGCAAATAGAGTTTCCTTCTAGGGATGTTTCTCTCTACTTTTGCTCATTTTTTTG GTGTGCTTTGGTGACTTGGTCATTGAGTTTTTTTGGTTTTGAAAATGTAATATGGTTAGTTTAGTTAAAGGTTTGAGATTAGAGATGGTAAGTTAACATT GGGCACAAAGTTGTATAGGAAGAAATAAAAACACTTCTTCCTATTTTCTTCTCTAATGTTATTCCAAACTCTTACTAATATTGTGTACAGTGTTGCTTTT TCTAATGAGTATTTTAACTCAGGCTTAGTTTATGATAAGCACCCAAAATAAA
• Tissue: pods
• Gene name: LI_gene_183885;
• Additional information: details;

Expression of Ll_transcript_288714

FPKM

• PAB: 44.2
• PNAB: 7
• PS1: 11.2
• PS2: 8.5
• PS3: 13.5
• PW1: 9.5
• PW2: 11
• PW3: 12.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288714

• Blastp: Protein MEI2-like 2 from Oryza sativa with 53.99% of identity
• Blastx: Protein MEI2-like 3 from Arabidopsis with 74.35% of identity
• Eggnog: Rna-binding protein(ENOG4111R9F)
• Kegg: Link to kegg annotations (4330544)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415284.1)
• Pfam: RNA recognition motif 2 (PF04059.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;