Ll_transcript_288705

• Id Trinity: TRINITY_DN51300_c1_g1_i9
• Name Transcript: Ll_transcript_288705
• Sequence: AAAAAACCTTTAAATACAGTTGAATCCTCAACAATCCCAAAAAACCAAACCATTGAAACTAAATTTCTATCTATCAATCATTCTCTACTACTTTTCACTT CTCTGAGGTCACGCACCAATCATCTTCATCACTCTTCTCTCAAAAGATTCCCCATTTTCTCAAAACACTGTGCTAAAGGATCAAGCTTTCGTGTCTCAGG ATCATTTCTCTCTTACCTTCAAGCTTTAGGGTTTTCTGATTTTTTGTACCCTTTTTAGAGAAGGGTGATGCAATGAAGCAGTCTCTTGATCCTTCATCTT TGGGTACTTCCATGTTTCGATCTATAAATATGCCTAAAGAAGCGGGGCCGGCTGCGTGGGGTGTTTTATCTGGATCCGATTCCTACTATGCCTCATCTGA TGCTAGCCTCTTTTCTAGCTCATTACCTGTTCTTCCACATGAAAAATTGAACTTAAGTGACATGAAAAACAGTTACCAATCATCTGGCTTTAAAAAGCTC CACCAAGATATTCCAGGCAATGATTCACCTGAAGATGTTGACACTAATGCAATTGGAAGTATGCTTCCCGATGACGAGGAGGAACTATTAGCTGGTATAA TGGATGATTTTGACCTAAGTGGTTTGCCTGGTTCCCTTGAGGACTTGGAAGAGTATGATCTTTTCGGTAGTGGCGGAGGCATGGAACTAGAAACTGACCC ACAAGAAAGTCTCAGTGTGGGTATGTCTAAGTTAAGCTTCTCTGATAGCACTACTGGCAATGGTTTGCCTCTTAATTCTTTTCCTAATGGTGTGGGAGCT GTTGCCGGAGAACATCCGTTGGGAGAGCATCCATCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTTGAGGATTCCGAGCTGAAAGCTCTTTTTG AGCAATATGGTGATATTAGAACCCTCTTTACTGCCCGTAAACAGCGGGGGTTTGTAATGATATCCTATTATGACATCCGCGCTGCTCGAACAGCCATGCG TGCATTACAAAACAAACCTCTTCGGCGCAGGAAACTTGACATTCACTTCTCAATACCAAAGGACAATCCATCAGACAAGGATATCAACCAAGGAACCTTG GTAGTTTTCAATTTAGATCCTTCGGTTTCAAATGAAGACCTCCGTCAAATATTTGGGGCTTATGGAGAGGTCAAAGAGATAAGGGAAACTCCTCACAAGA GGCATCATAAGTTTATTGAATTTTATGATGTCAGAGCCGCAGAAGCTGCACTTAAGTCATTGAATAGGAGTGACATAGCTGGTAAACGCATAAAGCTGGA GCCTAGTCGCCCTGGAGGAGCTCGTCGAAAGTGTGTATATTAATAATTTGACAATTGATATTGTTTTGATATTCTGTTTATCTCTGTGGTGAAAATCATT GTTCTGCATTGTGTGAATATGAAGAAACCGATGAGGCATCTAGAGACCTTTCTGCTGTTAAATAGAGTAGCACAAATGATAATCTCTGGCTTATCTTTCT CTGGTGCTTTGTGAGACAGATCAAACACTGTCGAAATTATTTGAAATTAATTAATATTGGGATTGCGTTCGAGTAAAACGGCTTTCACCAAATGCTCCAT AAAAATTTGTTATTCGAGAGTAGAAAAATGTTATATGGATATACCTCCCTCTGTTTTCTGGCACCATTATTTGATGCAAAAGTATATAATTGATAATACC TTGCACCTTGTAGTTTGATGCTCCAACTTAATCAAGATCTTGATCAAGATGAATCTCGGAGTTTCCGATATCAAGTGGGTTCTCCTGTGGCAAACTCTCC ACCAGGTAATTGGTTCCAGTTCAGCAGCCCTGTTGAGCAGAATTCAATGCAAACTATGAATAACTCTCCCGGTTCTAGGATCATAGGCCCTACAACAGGC AACCATTTTTCAGGATTAGCTTCAATTTTGCAACCTCAGGTATCAAACAATGTGAAGGGTGCAGCTATTGGCAAGGACTTAAGAACTAGTAGTCATGAAG AGCACATATTTACCAGTATGAATTCAACAAACGGTACGACTTTTCAGTCGCATTCACTTCCAGAGCCAAAGTTCAGCCAATACTGTGGACCTTTATCTTC TTTCGGTCAATCGACATCAAATGGATTGTCAATTGAGACCTTGTCTGGGCCACAGTTTTTATGGGGAAGTCCAACCCTCTACTCAGATCATAGCAAACCT TCAGCTTGGCCAAGACCATCCTTGGGGAATCCATTTACCTCAAATGGAAAGAGTCACGCCTTCCCATATTCGTCGCAGAATAATTCCTTCATTGGTTCAT CCCAGCATCATCATGTTGGCTCTGCTCCATCTGGTTTGCCTTTTGAGCGGCGGTTCGGTTTCCTTCCCGAGTCACCTGAAACTTCATTCACGAGTAATGT TGGTTATGGAGGCATGGGTCTAGGGAACAATGATGGAAATTACATGGTTAATATGGGTGGATCTATTAATGCTGGGATTAATATGTCAAGAAATGTCCCT GATATTGGTTCATCAAACTTCAGAATGAGATCTTCTCCTCGGCTTAACCCTGTGTTTTTGGGTACTGGTCCTTACCCCGGACCGCCACCTGCTACCTTCG AGAGTTTGACTGACCGTGCTCGTAGTAGATGGATAGATAACAACGGGAGTCAAGTTGATAGCAAGAAGCAATTTCAGCTTGACTTGGATAAGATTAAAAA TGGCGAAGATGCAAGGACTACATTGATGTTAAAGAATATCCCTAATAAGTATGATGAACCCTAAGACCACTGTTTATTGACCTTGTTTTTTTCATTGGGT GCTTGATGATATATTGTTTGTTGATAACCTGCAGATACACCTCGAAAATGTTATTAGCTGCCATCGATGAAAATCACAAGGGTACCTATGATTTTATCTA TCTGCCGATTGACTTTAAGGTATATGTTGTGTTATTTTAATGAGTTGTTTATTTTTTCCTTGAGTTGCCATTATATCCCTGACTTCCTTCTGAATTGTGA AGCTGATTATTCCTTTTTTTGTTCGGGACTTCTAATTGCAGAATAAATGCAATGTGGGTTATGCGTTTATCAACATGCTGTCACCTTTGCTTATTATTCC ATTCTATGAGGTTCTTATGTTTATTTTCTATATTTCTATCATTTTCCCTGGCCAAAGTTTTCTTCTTTGTTCGTGTTTTCTAACATTTTCTTTATCTTAC TATAGCTAATGTTTTCTTATACAAAATTTAGCAGTTAGTGGTATCATGTAAATTATTAAAGGAAGGGTAATTGGAAAAGCCTAATATTTTTCTCCCCGAA TTTCGAAGTGAAATTCACTTTCGTTACTTATTTTGCAGACATTCAATGGGAAAAAATGGGAGAAGTTTAACAGTGAAAAAGTTGCTTCTTTGGCATATGC TCGAATCCAAGGAAAGACCGCCCTTGTAAGCCACTTCCAAAACTCAAGTTTGATGAATGAAGATAAGCGCTGCCGCCCTATTCTCTTTCACTCGGAGGGT CCTGAAGCTGGTGATCAGATCATACAAGAGCATCTTCCTTCCAATAATCTAAATGTTCAGGAACATAGGCCAAGTGAGTCACATTCGAACGATTTTCATG GAAATCCTCCAAATGATGGTTTTTCTGTGAGCTTGGAGACAAATTAACATTACATCAGATGCATAGTTGCATGAGTCCAATGTGGTTACTGTTAATGTGA ACATTTGCATGTATGTCTTGGTTATATTTAGGAAGGATGTAGATTTTGTATCATAGTTACATTCCTTAGAGTATTTTGCCAGAGAGCTTCAGAAGCTTGG AGCATTTTGGTTGATTTTCTTGCTGAACAAGTAGCTGAATCTGATTATATGTTCAAGGTGAGAGCAAAGGCTGAAGGATTGAGCAAATAGAGTTTCCTTC TAGGGATGTTTCTCTCTACTTTTGCTCATTTTTTTGGTGTGCTTTGGTGACTTGGTCATTGAGTTTTTTTGGTTTTGAAAATGTAATATGGTTAGTTTAG TTAAAGGTTTGAGATTAGAGATGGTAAGTTAACATTGGGCACAAAGTTGTATAGGAAGAAATAAAAACACTTCTTCCTATTTTCTTCTCTAATGTTATTC CAAACTCTTACTAATATTGTGTACAGTGTTGCTTTTTCTAATGAGTATTTTAACTCAGGCTTAGTTTATGATAAGCACCCAAAATAAA
• Tissue: pods
• Gene name: LI_gene_183885;
• Additional information: details;

Expression of Ll_transcript_288705

FPKM

• PAB: 1.4
• PNAB: 0.7
• PS1: 0.1
• PS2: 0.1
• PS3: 0
• PW1: 0.9
• PW2: 1
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288705

• Blastp: Protein MEI2-like 5 from Arabidopsis with 66.76% of identity
• Blastx: Protein MEI2-like 3 from Arabidopsis with 74.35% of identity
• Eggnog: Rna-binding protein(ENOG4111R9F)
• Kegg: Link to kegg annotations (AT1G29400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415284.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;