Ll_transcript_288666

• Id Trinity: TRINITY_DN51305_c3_g2_i2
• Name Transcript: Ll_transcript_288666
• Sequence: CAGTGCTATTCAATCATTTTATCATCTTTGTAGTAGCGTTCGGCAGGCGGGTTAGAATGGTATGGAACATATCATGTGGGTTTCATTATTGAGTGTTTCA AGTAATACAGAATCTTCCAGGTGCCATTCAACTTGGTACCTGCGATGGTGGCTTAACATAGAAAAGTTTGCTTTAAAGCATGATATTGCTTCAATTTCAT ACTATAGAGATTTCAGTGACTTGTTCTTGGTGTATTGACCTAGAGCATGATAATGCTTCAATTTCTCTTTTTGCCGGTCGGTTTGATGTTTTACTTACCT TGATGTTTGCTGTACAGTATCAAGAGTGGAGATAGGAAGCTCTTTGGATCTCCCTTGGTTACTTATTTGGTAGAAGACCCTCAATTTGGAGCCAACATTG AGGCATCTGTACATAAAATATTGTCACCTTTAAGAAAAGCATATTCTTCGACCAAGTCTCATGATGGGAAGGAAGATGGTTTCATTTCCGCTGGCAGTGA TGAGCAATCGAACATCTCCAGTGCTGAATGTGAGTCAAGGACCCTGACAACTGGCTGCATCGAGCAAGAGGGGACATCCTATGGGGAGTCGTCTTTCAAA CTTTTTTTGACTAATGAAAGCTGTTTGAGCTATGATACCATTGAGAAGGATTCTCTTATAAAGCCCAGTCGACATATAAGAGTATTCCTTGACTGGACTG GCAGTGAACATGCATTATATGATGCCAGCTTCCTGAGAGATCTCCCTGAAGTTCACAAGACTGGGTTCACAGTGAAGAAAACCCGGCAAGAAGCTATTTC TTTGTTTTCTTGCTTGGAGGCATTCTTGACTGATGAACCTCTAGGACCCGATGACATGTGGTACTGCCCTGGATGCAAGGAACACAGACAAGCTACGAAG AAGCTAGATTTATGGAAATTGCCGGAGATCCTTGTTTTTCACTTAAAACGATTCTCATACAGCAGATACCTGAAAAACAAACTTGACACTTTCGTGAACT TTCCCATTCACAACCTTGATTTGACCAAGTATGTTAAAACTGAGGATGGACAGTCCTACGTGTATGACCTTTATGCAATCAGCAACCATTATGGTGGTCT TGGTGGTGGGCATTACACTGCGTATGCTAAGATGGCGGATGACAATAAATGGTACCATTTTGATGATAGTCATGTCAGTCCTGTCACTGAAGCTGAAATT AAATCTTCAGCTGCATATGTATTGTTTTATCAGAGAAGAAGCAAAGCGCAGATGGAAGGAGAATCTCAGTTTCATACAGGTTCTCATAGACAGTGATAGG GCATTTTTGTTATATTTTATACCTGGATTATATGTTAATTACAATGTGGAGCTTAGGTCCTGGATAGTTTATGGTACTCTACAAAGGAAAACAAGCTAAA AGTTGAAGACAAAATGTTACTATGTCGGAACAGTAATTAAGCCGATGTTCAGGCGAGGCTCTGGAAACCATTTTCATTAGGAGTCTCTGTTATTATTACA TGAATTGTACCATTTTTTGACCCAGAAATTTTGGCAGCCTATGTACTTGTTTAGATATTTGTTATTTAATTGGAGATTAAAACAATAATGAACCTATCAC TGGTGTTGTGGTAGTTGTTAGTATCCATGTTATGCTAATGATTGTGAAAGAAGTGTACCCATTTTCCATTATGTCAGGATTCTGGAATGTAATATCATGC AACAATAACAAAATGTGTTGAAGAGACTTTAAATGGCGGCTGATTATATCTGCTTGTTTTTTTGTTGTCTATTTTAAATAAAGGCTTATTGTCCTACTTT TGTATCTAAATCATCGGCAT
• Tissue: pods
• Gene name: LI_gene_183922;
• Additional information: details;

Expression of Ll_transcript_288666

FPKM

• PAB: 2
• PNAB: 4.3
• PS1: 3.9
• PS2: 6.2
• PS3: 5.4
• PW1: 3.2
• PW2: 3.5
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288666

• Blastp: Ubiquitin carboxyl-terminal hydrolase 10 from Arabidopsis with 77.37% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 10 from Arabidopsis with 58.75% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5560)
• Kegg: Link to kegg annotations (AT4G10570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431269.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF13423.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;