Ll_transcript_289467

• Id Trinity: TRINITY_DN51308_c0_g2_i1
• Name Transcript: Ll_transcript_289467
• Sequence: TTCCTGAAAGGCCCAAACTCAACCTTAATTCCCCCCAAATACAGTGTCGGGTTTTGATCCTTGGAGTTGGGTCCGATAAGAAGAACCACCCGTTTTGAGT GATGTCGCTCCTCCCAATAACATGGAACACAGAAACAGAGCAATTTCCTCCGACATTTATTCCTCAAACAATTTCTCCCTTTTTGCACCATCAATTATTT CATTCTCATTATTGCTTATTAATATTCACTATCTATTTGTTTTGTTGTTTAATTGAAGAAATCTTTGCTTCAGTGTAAGAATGGGGAAAAAGTCTTATTC ATCTTCATCAACATGGCGTTATATTCAACCTCGCTATTACGTAAAGAGACCTAAACGACTCGCATTACTCTTTCTCTTTTGCATTTCTCTTACTTGGCTT TACTATGATCGCCAATCGCTTAACCGGGATCATCAGGAGGATATTTTGAAATTAAAAGATGAGGTTGCCCGCTTGCAGAATATACTGCTAGAAATGAAGA CCAATATGAACGGCTCATCAGAGACAGAGAGTATCCAAAATGGTGAAAAATTCAGTGAATTCACCAACAGCATTTCTATTGAGGATGATGATATTAGCAT ACAACGGAGGGAGAAAGTAAAAGATGCTATGCTTCATGCATGGACATCTTATGAAAACTATGCTTGGGGCATGGATGAACTTAAGCCTGAAACAAGGATC GGTGTTGACAGTTTTGGCGGTCTAGGGGCAACTTTAGTAGATTCACTTGACACACTATATATAATGGGTCTTGATTCCCAGTTCAAAAGAGCTAGAGAGT GAGTGGAACTTTATTTTTAATACAGTTGGTTATGCAGCCTGCTTCTCTATATGTGCTTCCAAATATTTGTGTAACTGTTTTCCTGTGAATATTATTCTTG ATTTCTTGTTACATTCTTTTAACTTCTCTGTGATGGGTTGAATTGGAAAAGTAAAAATGGAGAAAGGATTTCCTCTATATTCTGTGTCCTGGTCTCTGGG GGATATCTCATAACCACTCATTTGTGTGGATTGCAAAATCATTGTATTTTAACAAGGACATCGAAGTTAGTGTGTTTGAGACAACCATAAGAGTTCTGGG TGGTCTTCTTAGTGCTTATGATCTCTCTGGTGACAAATTATTTCTGGAAAAGGCTAGAGATATTGCAGATAAGCTGTTGCCTGCTTGGAAAACACCTTCA GGAATCCCCTTTAATAGAATTAACTTGGCAAATGGAAATGCAAATAATCCCAGGTGGCAACGGGGAAACAGTATTCTTGCGGATTCTGGTTCAGAGCAAC TTGAATTTATTGCTCTCTCTCAAAGGACAAAAGACCCCAAGTACCAACAGAAGGTGGAGAAGGTCATCAAAGAGCTTCGTAAAAATTTTCCTAAGGATGG ACTGCTTCCTATATATATTAATCCACTAACTGGAACTGTGTCAACTGGAACAATTACATTTGGTGCTATGGGTGATAGTTTCTATGAGTATCTACTCAAG GCCTGGATACAAGGGAATAAAACTGAAGCAGTAAAGGTTTACAGGTGATGAACATGGAACACTATATTGAAAAATCAAGTTTTCGTTGTCTTAGTGATCT TGTCATGTGTAACAAGGCATGCACCTAACTCTACCTCACTCAAGCACCATGTACATATTTTGCTGCCATAAGGACTGCTACAGATCCTGTTCCCAAAATC GTGCATTTTTTAGTATTTTTATATTTAATAGAAGTTAATTTTGTTATTCTTGGAGCTCTCCAAAGTGTATATTCTACAAAACACCTGACTTTTGACATGC ATGCCATTACTAAATTATATGCTCTTTAGCATGCTTTTTTTGTTTGATTTGATATGCTACAACCATCTGGCCAGCTTTCTTTTCTTTGCTTTTTTTTCGT TAATATGAAAGTTCAAACTTGGAAGTAGGCCTGCACCTGGGCCCTTGTATATTTAAATGTGCAAGCAAATGGTGTATTCAGGGAGATGTGGGAGACATCA ATGAAAGGCCTTGAAAGCTTGGTTAGAAAGTCAACACCATCTTCTTTTACGTACATAGCTGAGAAGCTTGGAAATGAACTCTTTCATAAGATGGATGAAT TAGCTTGTTTTGTTCCTGGAATGCTGGCATTGGGATCTTCTGGCTACAGTCCTGGAGAAGCTAGCAAGTTTATGTCTCTTGCAGAGGAGCTTGCATGGAC TTGTTACAATTTCTACCAGTCAACACCAACTAAATTGGCAGGGGAGAACTATTTCTTCCGTAAGGGAGAGGTTTGAATCTTTTATTCTCGAGTTCTTTAG AAGTTTCATGAGACGGCGTTTGTGTGCTAAGGTAAGAAAATTGTAGGATATGACTGTTGGCACCTCGTGGAATATCCAAAGGCCTGAAACAATTGAGTCG CTCTTCTACCTCTGGCGTTTAACTGGAAACAAGACATACCAAGAATGGGGTTGGGATATTTTCCAAGCTTTTGAAAACAACTCTCGGTCTGAGACAGGAT ATGTTGGACTCAAAGATGTGACTACTGGTGCCAAAGATAATATGATGCAGAGCTTCTTCCTTGCGGAAACACTTAAGTACCTCTATCTCTTGTTTTCACC TCCATCAATCATCTCTCTTGATGAATGGGTGTTCAACACAGAAGCCCACCCTTTAAGAATTGTGACTAGAAATGATCCTCCTGAGGAATTGAGTGTTGAC CAAGAAGAGAAATTTCCACGCCATTTGTACGGTAGAAAAGAAGGTAGATTGGATCACAAGTAACTTAAGGGTTGTTGCTTTAAGCTTATGGTAAGTAAAC CCTGAAGATTTCTGAGTTCCCTACTCTCAAATTAGATCCTCGACTTCAACTTGGTGCTTGCATGAGTGAACCCATTTTTATTAATGGGCCGAACAAGGGA CAACTTGTCCCGCTTTATCAACATACAGTTTGACTGTCTATCACGTTTAATCTGAAGTTACATGTTAATGTGGTGATGAATACTTGGATGGTTTACTTCT TTGTATAGTAGGATAAAATTGGTGTAAATGCCTACGTAGGAATAGAAACTGCTGTAATCTTTTTTTAATCATTTTTTGGCACAATTGTAAATCCTTGTGT CTCAGTTGACTGACCATTTAGTGGAATGTTGTGTAACTGTAGATAAAGTTATCCAGTTTTGAAATTTTAGCTTTATGACTGTTAAAATTCAAGATCAAGC TTGTTTGAGTTCTATTTTGTGTTAAAACTTGGGGCTTAAAGCAGCACTGCCTGAGAAAATTGTGGTGCCAGTTCTGTTGACTCTTTAATTTTGGC
• Tissue: pods
• Gene name: LI_gene_183935;
• Additional information: details;

Expression of Ll_transcript_289467

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.6
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289467

• Blastp: Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 from Arabidopsis with 50.9% of identity
• Blastx: Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 from Arabidopsis with 78.74% of identity
• Eggnog: Mannosidase alpha class(ENOG410XP04)
• Kegg: Link to kegg annotations (AT3G21160)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464414.1)
• Pfam: Glycosyl hydrolase family 47 (PF01532.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;