| Id Trinity | TRINITY_DN51308_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_289482 |
| Sequence | TTCCTGAAAGGCCCAAACTCAACCTTAATTCCCCCCAAATACAGTGTCGGGTTTTGATCCTTGGAGTTGGGTCCGATAAGAAGAACCACCCGTTTTGAGT GATGTCGCTCCTCCCAATAACATGGAACACAGAAACAGAGCAATTTCCTCCGACATTTATTCCTCAAACAATTTCTCCCTTTTTGCACCATCAATTATTT CATTCTCATTATTGCTTATTAATATTCACTATCTATTTGTTTTGTTGTTTAATTGAAGAAATCTTTGCTTCAGTGTAAGAATGGGGAAAAAGTCTTATTC ATCTTCATCAACATGGCGTTATATTCAACCTCGCTATTACGTAAAGAGACCTAAACGACTCGCATTACTCTTTCTCTTTTGCATTTCTCTTACTTGGCTT TACTATGATCGCCAATCGCTTAACCGGGATCATCAGGAGGATATTTTGAAATTAAAAGATGAGGTTGCCCGCTTGCAGAATATACTGCTAGAAATGAAGA CCAATATGAACGGCTCATCAGAGACAGAGAGTATCCAAAATGGTGAAAAATTCAGTGAATTCACCAACAGCATTTCTATTGAGGATGATGATATTAGCAT ACAACGGAGGGAGAAAGTAAAAGATGCTATGCTTCATGCATGGACATCTTATGAAAACTATGCTTGGGGCATGGATGAACTTAAGCCTGAAACAAGGATC GGTGTTGACAGTTTTGGCGGTCTAGGGGCAACTTTAGTAGATTCACTTGACACACTATATATAATGGGTCTTGATTCCCAGTTCAAAAGAGCTAGAGAGT GGATTGCAAAATCATTGTATTTTAACAAGGACATCGAAGTTAGTGTGTTTGAGACAACCATAAGAGTTCTGGGTGGTCTTCTTAGTGCTTATGATCTCTC TGGTGACAAATTATTTCTGGAAAAGGCTAGAGATATTGCAGATAAGCTGTTGCCTGCTTGGAAAACACCTTCAGGAATCCCCTTTAATAGAATTAACTTG GCAAATGGAAATGCAAATAATCCCAGGTGGCAACGGGGAAACAGTATTCTTGCGGATTCTGGTTCAGAGCAACTTGAATTTATTGCTCTCTCTCAAAGGA CAAAAGACCCCAAGTACCAACAGAAGGTGGAGAAGGTCATCAAAGAGCTTCGTAAAAATTTTCCTAAGGATGGACTGCTTCCTATATATATTAATCCACT AACTGGAACTGTGTCAACTGGAACAATTACATTTGGTGCTATGGGTGATAGGTAATTATTAATGACACTAATAGTATCTTATAACTTCAGCATTTCATGA TATTAACTTTATGCAAAATTTTGTTGAACTCTTTGATGACCCTTATAGAATTTAGATGATACAGATGAGTTGTTGACCCTTTATGAGGAATGGAACAGCT TGATGACAAATCTAATAGAACAGAGGAATTCAGTGATCTGAATCATTTACCCACATTGACGTGTTATGGTTACTGGGAATATGTAATAAAATTGGAGTTA TGAATGTTTATGGATTCAGAGGGCACATTATGATTTTTAATATGTTAATGTGCACTACAATAATGGTCACTGATTACCAAAGATGTTTCCATGCATGAAT GTTGTGTAATCTTTACATATTTTAGAGGAAGATCATTTTTGAACAATAGCAGAGTTGATTATTCAGCTGAATTATATGTTTTATTCTGTTGATTGTTAGT AACAGATTAACAGTGTGACATATGACAACATGTTAAAAGCAAATGTCATCTGGCGTATTTAACCTTCAATAGGTTGTAGACTGTTTACCATTTTCCAAAT TGCTTTCCCACATACTTAAAAAGGCTGCCCACTTACATCTTGCAGTTTCTATGAGTATCTACTCAAGGCCTGGATACAAGGGAATAAAACTGAAGCAGTA AAGGTTTACAGGGAGATGTGGGAGACATCAATGAAAGGCCTTGAAAGCTTGGTTAGAAAGTCAACACCATCTTCTTTTACGTACATAGCTGAGAAGCTTG GAAATGAACTCTTTCATAAGATGGATGAATTAGCTTGTTTTGTTCCTGGAATGCTGGCATTGGGATCTTCTGGCTACAGTCCTGGAGAAGCTAGCAAGTT TATGTCTCTTGCAGAGGAGCTTGCATGGACTTGTTACAATTTCTACCAGTCAACACCAACTAAATTGGCAGGGGAGAACTATTTCTTCCGTAAGGGAGAG GATATGACTGTTGGCACCTCGTGGAATATCCAAAGGCCTGAAACAATTGAGTCGCTCTTCTACCTCTGGCGTTTAACTGGAAACAAGACATACCAAGAAT GGGGTTGGGATATTTTCCAAGCTTTTGAAAACAACTCTCGGTCTGAGACAGGATATGTTGGACTCAAAGATGTGACTACTGGTGCCAAAGATAATATGAT GCAGAGCTTCTTCCTTGCGGAAACACTTAAGTACCTCTATCTCTTGTTTTCACCTCCATCAATCATCTCTCTTGATGAATGGGTGTTCAACACAGAAGCC CACCCTTTAAGAATTGTGACTAGAAATGATCCTCCTGAGGAATTGAGTGTTGACCAAGAAGAGAAATTTCCACGCCATTTGTACGGTAGAAAAGAAGGTA GATTGGATCACAAGTAACTTAAGGGTTGTTGCTTTAAGCTTATGGTAAGTAAACCCTGAAGATTTCTGAGTTCCCTACTCTCAAATTAGATCCTCGACTT CAACTTGGTGCTTGCATGAGTGAACCCATTTTTATTAATGGGCCGAACAAGGGACAACTTGTCCCGCTTTATCAACATACAGTTTGACTGTCTATCACGT TTAATCTGAAGTTACATGTTAATGTGGTGATGAATACTTGGATGGTTTACTTCTTTGTATAGTAGGATAAAATTGGTGTAAATGCCTACGTAGGAATAGA AACTGCTGTAATCTTTTTTTAATCATTTTTTGGCACAATTGTAAATCCTTGTGTCTCAGTTGACTGACCATTTAGTGGAATGTTGTGTAACTGTAGATAA AGTTATCCAGTTTTGAAATTTTAGCTTTATGACTGTTAAAATTCAAGATCAAGCTTGTTTGAGTTCTATTTTGTGTTAAAACTTGGGGCTTAAAGCAGCA CTGCCTGAGAAAATTGTGGTGCCAGTTCTGTTGACTCTTTAATTTTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_183935; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289482
| Blastp | Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 from Arabidopsis with 63.09% of identity |
|---|---|
| Blastx | Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 from Arabidopsis with 79.27% of identity |
| Eggnog | Mannosidase alpha class(ENOG410XP04) |
| Kegg | Link to kegg annotations (AT3G21160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464414.1) |
| Pfam | Glycosyl hydrolase family 47 (PF01532.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |