| Id Trinity | TRINITY_DN51313_c0_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_289662 |
| Sequence | ATTGAATTGAACCGAAACACAAAACCCCAACTCTGTTTCTTTCTCTCTCTCTCTCTGAACCGAAAGACAGAGATCAATAACAATGGAAGCGATTCTGATT GATTGCGTTCAGAAGAGTCTTCGTCATTTCATGTATTCCAATGCTATCTTCATTTCTCACCGTCTCTGCGCTCAGTTCCCTTCTGAGTCAAATTTGCAGT TGTTAGCTGGCTGTTACTTGCAGAGTAATCAAGCCTATGCTGCGTACAATGTTTTAAAAGGAACACAGATGGATCAATCCCGATACTTATTTGCACTGTC ATGCTTTCAGATGGATCTTCTTAGTGAAGCTGAAGCAGCATTATGTCCTGCTAATGCCGAGGTTCCAAATGGTGCAGCTGGTCATTATTTATTAGGACTC ATTTACAGGTACACTGACAAAAGGGACAGTGCCATTCATCATTTTAATCAGGCACTATTTATGGATCCTCTAATGTGGGTGGCATATGAAGAGTTGTGCG TATTAGGTGCCGCTGAAGAAGCAACTGCAGTTTATGGTGAAGCAGCTGCTCTTTGCATAAAAAATCAATACATAAATTGCACAAATTCTCCAAGCCCAAA TTCATCAGCCGAGGATTGTAATGTAGTTGTTGGTAGATATTGTGAATCTGAAGATGCGAGTCCAAGACAGCTGAGACACATGCAAGGCCTAAAGGATATT GCTGGAAATCATCATGGATCATCTATGTTTGGGGGAGCTGGTGTTCAACTTATTAATAGTGGTCCATCTAACATATCATTTTATGACACCCCATCTCCAA TGGCTACACAGATGTCAAGTGTTGCCCCACCCCCTTTGTGTAGGAATGTGCTGCCAAATGGTCCAAATCTGGGTACTCTTAATGCCGACAGTGCTCCCAA GTCGACAGTGAACTCTACTATTCAAGCCCCTCGAAGAAAGTTTGTGGATGAAGGAAAGTTACGGAAGATTTCTGGTAGACTGTTCTCTGATTCTGCTCCT CGACGAAGTTCAAGACTGTCTAGTGAAGCAAGTGTAAATGCTAATGCTAATGTTGTGTCTGGGAATGGAACTAGTAACACTTCTAAGTATCTTGGAGTGT CAAAGCTTAACCCTATGGCATTTCGTGCCATGACAGCTCGTAAGGGACAGTCATGGGCCAATGAAAACATTGATGAAGGGATTCGTAATGATGTTCTAGA TGATTCTCGTTTAAACGTTACATCACCAACTTCTTGTTCATCTCCGGGCATTGAAACTAAATCTTATGAACCAGAAGCAGCGAAATTTACAGTTGGTGGG CTGGTGATAAGTGGTTCTAAAGTTGTCTCTGGTGCTTTAGAGATACTGACCCTTTTAAGAGTTCTTGGTGATGGTTATAGACTTGCCTGCTTGTATAGGT GTCAGGATGCACTGGACACCTATCTGAAACTTCCTCATAATCATTACAATACTGGCTGGGTTCTTTCTCAGGTTGGAAAAGCATACTTTGAATTAGTTGA TTATTCAGAAGCTGAACAGGCCTTTAGTCTTGCTCGTCAGATCACCCCTTATTGTTTGGAAGGAATGGATATATATTCAACAGCCCTTTATCATTTACAA GAAGATATGAAGTTAAGTTACCTTGCACAGGAACTTACATCAACAGATCGCTTAGCTCCTCAGTCTTGGTAGGAATACATTGAACTTTCTTATAATTATC TTGTTTAATAATCATTGGCATTTCTTTTCTTGATGTCAAAGTGTGTATGTCCATACCTTGCATTTGCTTAAATGCACATTTCTTCGATACCACTTTGAAG GGATATCTGATACATAAGCGACTCTCCCCTGCCTAGTTTTATATATGTATTACAGTTTCTTGCATAAAATTTGTGTATATTGTCCTACCTGAGATATCGC CTTCCGACGCCTTTCTATTCATAAATGTCCATATAGTATATTATCTTCTACTTAGGCACCAAGGAATGTGCTCTACATAAATTAGAGGTTAATAGTTACG AG BLAST |
| Tissue | pods |
| Gene name | LI_gene_183980; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289662
| Blastp | Cell division cycle protein 27 homolog B from Arabidopsis with 64.06% of identity |
|---|---|
| Blastx | Cell division cycle protein 27 homolog B from Arabidopsis with 63.62% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | Link to kegg annotations (AT2G20000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442778.1) |
| Pfam | Anaphase-promoting complex, cyclosome, subunit 3 (PF12895.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |