Ll_transcript_287580

• Id Trinity: TRINITY_DN51315_c1_g1_i5
• Name Transcript: Ll_transcript_287580
• Sequence: AGCTTCCTTATAAAAAAGTATATATTGAATAAAAATTTATTCTTTTATATTATTTTGGGTGAAATCTTGTTTGAAGTTTTGAACTCGAGCCTTTGAGCTT TTGAGTTCAGAGCTTTATTGGAATCTTTCTTCCTCCTTTCCTTGTTGAGGCGGAAACGGTAATGGCGACAACGATGGCTAACAGTACGAGCAGTAGTAGC AACTTGCCTTACAAACCTTACCGCCACCTTAAGACCCTTACCGATCACCACCGCGCTGTCTCCTGTGTCAAATTCTCCAACGACGGTACCCTTTTAGCCT CTTCCTCTCTCGACAAAACCCTAATTATTTGGTCCTCTTCCACCCTCTCCCTCCTCCACCGCCTCTCCGGTCACTCCGACGGCGTCTCCGATCTCGCCTG GTCCTCCGACTCCCACTACATCTGCTCCGCCTCCGACGACCGCACCCTCCGCATCTGGGACGCCACCCGCGGTGGCGACTGCATCAAAACCCTACGCGGT CACTCCGACGCCGTTTTCTGCGTTAACTTCAATCCTCAGTCCAATTACATCGTCTCTGGATCATTCGATGAGAGCATTAGGGTTTGGGAGGTTAAGACAG GGAAGTGCATCCACGTCATCACCGGTCACAACATGCCAGTCACGTCCGTGCACTTCAATCGCGACGGTTCGCTTATTGTATCTGGTAGTCACGATGGATC TTGCAAGATTTGGGATACTAGCTCGGGTACTCTGTTGAAGACGCTCATTGACGATAAAGTCCCTGCTGTTTCTTTTGCTAAGTTTTCTCCTAACGGCAAG TTCATACTCGTTGCTACTCTCAATGACACCCTTAAACTATGGAACTACGCAGCTGGGAAGTCTATAAAAAATTATTCAGGCCATGTGAATAGAGTATACT GCATCACTTCCACATTTTCTGTGACCAATGGAAAATACATTGTTAGTGGTTCAGAAGATAGATGTGTTTATTTATGGGATCTTCAGCAGAAAAGTATGGT TCAGAAACTTGAAGGCCACACAGATACTGTAATATCTGTTACGTGTCACCCAACCGAGAACAAAATTGCTTCTGCTGGCCTCGATAATGATAGAACTGTG AGGATTTGGGTACAGGATCTATGAACAATAGCAAAGCTGTATGTGGTTCATTTTTTATTCTTTTTATGATATTTTCTTCCGGTCTTTGTTTGTGTATGCA TATGTAAATCTGATTTAAATATACTATTTGTGATAGTTTCATCTTCCTGAATCACCTCTAGTTGATATTTGCTGTTCCTAATTGCTGCCTATTGAACAAG TTCTTTCTAAACATCTCCTTTAATTTGGTGTGTGAAAGTTCTTTTTTTCTAAAAAAAAGAAATTGACAACAATCTTTTGGTTTCTAACAATTGGTGCTTG TTTGCCAGGGAATCTTCCTAGACATGATTATGATAAGAAGTGACTTGCATATCTCCAATTCAAATTCAGCCCATGGGTTAATGCATTTAATTACGGACCT TGATTTCAAGGCAATTTGTGGCGCTCTCCATATCGGAACCAATGTGAACAAGCCTTGGTGTTTATCAATTTTAGAGCATGGTGCTCTTTCGAAATTTATA GTAGTTTGTTGCATAAAGTAAAATGTAATTCACTTATAGATAATACACTTTTAGTATTCAACTTTGGAACACACCTTAAAATTGCCCGGCAATGTGAAAT ATGTGGGCCATAATTCATCCATGACAAGTGAAATGCAGCACCTGCAATTTGTTTAAAATGCATTTGACCTTTGCCATTCAAATTAATGGGTGAAATGGTA AAATACTATTGCAAGGCATAACTCAAAATGTTGAAGTCATTAGATCCACAGCTAAAATATTGTAAATCATGACTGATGCTATGACATTTAGCATGAGTTA GGATTAAGAGACACATGTTACAATTATCTCTGTTTGTGTGTATAAATATTTAATATTATC
• Tissue: pods
• Gene name: LI_gene_183992;
• Additional information: details;

Expression of Ll_transcript_287580

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 1.1
• PS2: 0.3
• PS3: 0.6
• PW1: 0.5
• PW2: 0.9
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_287580

• Blastp: COMPASS-like H3K4 histone methylase component WDR5B from Arabidopsis with 72.01% of identity
• Blastx: COMPASS-like H3K4 histone methylase component WDR5B from Arabidopsis with 73.27% of identity
• Eggnog: Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for(ENOG410XP3K)
• Kegg: Link to kegg annotations (AT4G02730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452681.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;